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A Single Nucleotide Polymorphism in LOC534614 as an Unknown Gene Associated with Body Weight and Cold Carcass Weight in Hanwoo (Korean Cattle)
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 Title & Authors
A Single Nucleotide Polymorphism in LOC534614 as an Unknown Gene Associated with Body Weight and Cold Carcass Weight in Hanwoo (Korean Cattle)
Lee, Y.S.; Oh, D.Y.; Kim, J.J.; Lee, J.H.; Park, H.S.; Yeo, J.S.;
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 Abstract
A major aim of cattle genome research is to identify candidate genes associated with meat quantity and quality through QTL analysis for application in the livestock industry. Therefore, this study focused on discovery of useful SNPs within the LOC534614 gene, containing 12273_165 SNP which is located on the same site as the QTL on chromosome 6, and evaluation of the association between SNP and body weight and cold carcass weight in Hanwoo (Korean cattle) As a result of a BLAST search of the NCBI web site, we discovered that the mRNA sequence of the LOC534614 gene was similar to that of the coiled-coil domain containing 158 (CCDC158) for dog and human. According to the direct DNA sequence from the CCDC158 gene, we identified 19 polymorphic SNPs within exons and their flanking regions. Among them, 17 polymorphic SNPs were selected for genotyping in Hanwoo (n
 Keywords
SNP;Hanwoo;QTL;CCDC158 Gene;Weight;
 Language
English
 Cited by
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닭의 모색 연관 유전자인 MC1R, MITF, TYRP1의 SNP(Single Nucleotide Polymorphism) 규명,김병기;변윤화;하재정;정대진;이윤석;형기은;여정수;오동엽;

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1.
Identification of Superior Single Nucleotide Polymorphisms (SNP) Combinations Related to Economic Traits by Genotype Matrix Mapping (GMM) in Hanwoo (Korean Cattle), Asian-Australasian Journal of Animal Sciences, 2011, 24, 11, 1504  crossref(new windwow)
2.
Application of Linkage Disequilibrium Mapping Methods to Detect QTL for Carcass Quality on Chromosome 6 Using a High Density SNP Map in Hanwoo, Asian-Australasian Journal of Animal Sciences, 2011, 24, 4, 457  crossref(new windwow)
3.
A SNP Harvester Analysis to Better Detect SNPs of CCDC158 Gene That Are Associated with Carcass Quality Traits in Hanwoo, Asian-Australasian Journal of Animal Sciences, 2013, 26, 6, 766  crossref(new windwow)
4.
Identification of SNP(Single Nucleotide Polymorphism) from MC1R, MITF and TYRP1 associated with Feather Color in Chicken, Korean Journal of Poultry Science, 2014, 41, 1, 29  crossref(new windwow)
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