DOI QR코드

DOI QR Code

Evaluation of Genetic Variation and Phylogenetic Relationship among North Indian Cattle Breeds

Sharma, Rekha;Pandey, A.K.;Singh, Y.;Prakash, B.;Mishra, B.P.;Kathiravan, P.;Singh, P.K.;Singh, G.

  • 투고 : 2007.01.20
  • 심사 : 2008.03.20
  • 발행 : 2009.01.01

초록

In the present study, genetic analyses of diversity and differentiation were performed on four breeds of Indian zebu cattle (Bos indicus). In total, 181 animals belonging to Ponwar, Kherigarh, Gangatiri and Kenkatha breeds were genotyped for 20 cattle specific microsatellite markers. Mean number of alleles observed per locus (MNA) varied between 5.75 (Kenkatha) to 6.05 (Kherigarh). The observed and expected heterozygosity for the breeds varied from 0.48 (Gangatiri) to 0.58 (Kherigarh) and 0.65 (Kenkatha) to 0.70 (Kherigarh), respectively. $F_{IS}$ estimates of all the breeds indicated significant deficit of heterozygotes being 28.8%, 25.9%, 17.7% and 17.7% for Gangatiri, Ponwar, Kherigarh and Kenkatha, respectively. The $F_{ST}$ estimates demonstrated that 10.6% was the average genetic differentiation among the breeds. Nei's genetic distance DA and Cavalli- Sforza and Edwards Chord distance ($D_C$) and the phylogenetic tree constructed from these reflected the close genetic relationship of Gangatiri and Kenkatha, whereas Ponwar appears to be more distant.

키워드

Cattle;Genetic Variation;India;Microsatellite

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피인용 문헌

  1. Effect of SNP origin on analyses of genetic diversity in cattle vol.50, pp.8, 2010, https://doi.org/10.5713/ajas.2009.70047
  2. Detection of occurrence of a recent genetic bottleneck event in Indian hill cattle breed Bargur using microsatellite markers vol.44, pp.8, 2012, https://doi.org/10.5713/ajas.2009.70047
  3. Genetic diversity and relationship of Indian cattle inferred from microsatellite and mitochondrial DNA markers vol.16, pp.1, 2015, https://doi.org/10.5713/ajas.2009.70047

과제정보

연구 과제 주관 기관 : Indian Council of Agricultural Research