Korean Journal of Microbiology (미생물학회지)
- Volume 32 Issue 3
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- Pages.177-181
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- 1994
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- 0440-2413(pISSN)
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- 2383-9902(eISSN)
Phylogenetic Study of Ganoderma applanatum and Schizopora paradoxa Basd on 5S rRNA Sequences
5S rRNA 염기서열에 으한 잔나비걸상과 좀구멍버섯의 계통학적 연구
- Kim, Hak-Hyun (Department of Natural Sciences, and Research Center for Molecular Microbiology) ;
- Jung, Hack-Sung (Department of Natural Sciences, and Research Center for Molecular Microbiology)
- Published : 1994.01.01
Abstract
The sequences of the cytoplasmic 5S rRNAs(EMBL accession number X73589 and X73890) from two polupores, Ganoderma applanatum and Schizopora paradoxa, were determined by the direct chemical method for sequencing RNA and compared to the sequences of 9 reported mushrooms. 5S rRNAs of Ganoderma applanatum and Schizopora paradoxa consisted of 118 bases and fit the secondary structure model of the 5S rRNAs of basidiomycetes proposed by Huysmans et al. Based on Kimura’s K_nuc values, the closest fungus to Ganoderma applanatum was Ceratobasidium cornigerum and the one to Schizopora paradoxa was Bjerkandera adusta. When the secondary structures of 5S rRNAs of 11 mushrooms were compared the base substitution occurred at helix regions more than at loop regions. When a phylogenetic tree was constructed using the Neighbor program of the PHYLIP package, it partially discriminated and separated the mushrooms of the Hymenomycetes by the order.
담자균류 균심류의 영지과에 속하는 잔나비걸상(Ganoderma applanatum)과 구멍장이 버섯과에 속하는 좀구멍버섯 (Schizopora paradoxa) 두 종의 5S rRNA 염기서열들을 (EMBL accession mumbers X73589 and X73890) directchemical method로 분석 결정하고 담자균류 균심류와 복균류의 기존에 밝혀진 9종 버섯의 염기서열과 비교하였다. 잔나비걸상과 좀구멍버섯의 5S rRNA는 각각 118개의 염기로 구성되어 있으며 B형 5S rRNA에 해당하였고 Huysmans 등이 제시한 2차구조의 모델에 들어 맞으며 Walker와 Doolittle이 제시한 제 5 염기서열군에 속하였다. 진화거리를 나타내는 Kimura의 염기치환상수