DOI QR코드

DOI QR Code

Characteristics of Potato virus Y Isolated from Paprika in Korea

  • Choi, Hong-Soo (Department of Plant Pathology, National Institute of Agricultural Science and Technology) ;
  • Ko, Sug-Ju (Jeonnam Agricutural Research & Extension Services) ;
  • Kim, Mi-Kyeong ;
  • Park, Jin-Woo (Department of Plant Pathology, National Institute of Agricultural Science and Technology) ;
  • Lee, Su-Heon (Department of Plant Pathology, National Institute of Agricultural Science and Technology) ;
  • Kim, Kook-Hyung (School of Agricultural Biotechnology, Seoul National University) ;
  • Were, Hassan Karakacha (Department of Applied Genetics and Pest Management, Faculty of Agriculture, Kyushu University) ;
  • Chois, Jang-Kyung (Department of Agricultural Biology, Kangwon National University) ;
  • Takanami, Yoichi (Department of Applied Genetics and Pest Management, Faculty of Agriculture, Kyushu University)
  • Published : 2005.12.01

Abstract

A virus isolate collected from infected paprika (Capsicum annuum var. grossum) was characterized as Potato virus Y (PVY) based on biological, serological, cytopathological, and molecular properties. In host range studies, the paprika isolate produced the mosaic symptom on some tobacco, tomato and pepper (Capsicum annuum). A new paprika isolate also infected potato cultivars which is different biological characteristic compared to the other popular potyvirus infecting paprika, Pepper mottle virus (PepMoV). Previously reported PVY strains, $PVY^o$ and $PVY^N$ did not infect pepper and typical PepMoV isolates did not infect potato. Distinctive inclusion patterns of the scroll, pinwheel, long laminated inclusions, and helper components in the cytoplasm of infected cells were also different to those observed by the typical PVY isolate infections. However, the paprika isolate reacted to the monoclonal antibody of $PVY^N$ strain with high absorbance readings. RT-PCR amplification, cloning, and sequencing of the 3' untranslated region and a part of coat protein gene also added additional evidence of the paprika isolate as the $PVY^N$-related isolate. Multiple alignments as well as cluster dendrograms of PVY-paprika isolate revealed close phylogenetic relationship to the $PVY^N$ subgroup. Altogether, these results suggest that a new PVY isolate infecting paprika contained distinct characteristics compared to the other previously described PVY strains with closer relationship to the $PVY^N$ strain.

Keywords

References

  1. Altschul, S. F., Madden, T. L., Schffer, A. A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D. J. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucl. Acids Res. 25:3389-3402 https://doi.org/10.1093/nar/25.17.3389
  2. Bhat, A. I., Varma, A., Pappu, H. R., Rajamannar, M., Jain, R. K. and Praveen, S. 1999. N-terminal serology and sequence relationships indicate that a isolate of potyvirus from eggplant (Solanum melongena L.) is a strain of potato virus Y. Plant Pathol. 48:648-654 https://doi.org/10.1046/j.1365-3059.1999.00384.x
  3. Benson, D. A., Boguski, M., Lipman, D. J. and Ostell, J. 1996. GenBank. Nucl. Acids Res. 24:1-5 https://doi.org/10.1093/nar/24.1.1
  4. Cheong, S. R., Goto, T., Hahm, Y. I. and Choi, J. K. 1992. A strain of potato virus Y (PVY) isolated from potato plant in Korea. Korean J. Plant Pathol. 8:209-212
  5. Clark, M. F. and Bar-Joseph, M. 1984. Enzyme immunosorbent assays in plant virology. In: Maramorsch K, Koprowski H, eds. Methods in Virology, Vol VII Academic Press, New York, 51-85
  6. De Bokx, J. A. and Huttinga, H. 1981. Potato virus Y. CMI/AAB Descriptions of Plant Viruses No. 242
  7. Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791 https://doi.org/10.2307/2408678
  8. Francki, R. I. B., Fauquet, C. M., Knudson, D. L. and Brown, F. 1991. Classification and Nomenclature of viruses: Fifth Report of the International Committee on Taxonomy of Viruses. Arch. Virol. (Suppl) 2
  9. Frankel, M. J., Ward, C. W. and Shukla, D. D. 1989. The use of 3'-noncoding nucleotide sequences in the taxonomy of potyviruses: application to watermelon mosaic virus-2 and soybean mosaic. J. Gen. Virol. 70:2775-2783 https://doi.org/10.1099/0022-1317-70-10-2775
  10. Ko, S. J., Lee, Y. H., Cha, K. H., An, U. and Choi, H. S. 2003. Survey and identification of virus diseases on paprika in Jeonnam province. Korean J. Plant Pathol. 19:342 (abstract)
  11. Pappu, S. S., Brand, A., Pappu, H. R., Rybicki, E. P., Gough, K. H., Frankel, M. J. and Niblett, C. L. 1993. A polymerase chain reaction method adopted for selective amplification and cloning of 3'-sequences of potyviral genomes: application to dasheen mosaic virus. J. Virol. Methods 41:9-20 https://doi.org/10.1016/0166-0934(93)90158-N
  12. Park, E. K., Kim, J. J. and Boo, K. S. 1984. Two New PVY strains isolated from tobacco plant in Korea. Korean J. Plant Prot. 23:209-214
  13. Prescott, A. and Martin, C. 1987. A rapid method for the quantitive assesment of levels of specific mRNAs in plants. Plant Mol. Biol. Rep. 4:219-224 https://doi.org/10.1007/BF02675414
  14. Riechmann, J. L., Lain, S. and Garcia, J. A., 1992. Highlights and prospects of potyvirus molecular biology. J. Gen. Virol. 73:1-16 https://doi.org/10.1099/0022-1317-73-1-1
  15. Rodriguez-Cerezo, E., Gamble, K. P. and Shaw, J. G. 1991. A determinant of disease symptom severity is located in the 3'-terminal noncoding region of the RNA of a plant virus. Proc. Natl. Acad Sci. USA 88:9863-9867 https://doi.org/10.1073/pnas.88.21.9863
  16. Shukla, D. D. and Ward, C. W. 1989. Identification and classification of potyviruses on the basis of coat protein sequence data and serology. Arch. Virol. 106:171-200 https://doi.org/10.1007/BF01313952
  17. Song, S. H. 2002. Isolation and characterization of viruses infecting Capsicum annuum var. grossum in Korea. A thesis for the degree of master of science, Kangwon National University
  18. Thompson, J. D., Higgins, D. G. and Gibson, T. J. 1994. CLUSTALW: Improving the sensitivity of progressive multiple sequence alignment through weighting, position-specific gap penalties and weight matrix choice. Nucl. Acids Res. 22:4673-4680 https://doi.org/10.1093/nar/22.22.4673
  19. van der Vlugt, R. A. A., Leunissen, J. and Goldbach, R. 1993. Taxonomic relationships between distinct potato virus Y isolates based on detailed comparisions of the viral coat proteins and 3'-nontranslated regions. Arch. Virol. 131:361-375 https://doi.org/10.1007/BF01378638

Cited by

  1. The complete genome sequence of pepper severe mosaic virus and comparison with other potyviruses vol.151, pp.10, 2006, https://doi.org/10.1007/s00705-006-0776-1
  2. Occurrence of Bean common mosaic virus (BCMV) Infecting Peanut in Korea vol.22, pp.1, 2006, https://doi.org/10.5423/PPJ.2006.22.1.097
  3. Complete genome sequence supports Bell pepper mottle virus as a species of the genus Tobamovirus vol.152, pp.7, 2007, https://doi.org/10.1007/s00705-007-0950-0
  4. Outbreak of Cucumber mosaic virus and Tomato spotted wilt virus on Bell Pepper Grown in Jeonnam Province in Korea vol.24, pp.1, 2008, https://doi.org/10.5423/PPJ.2008.24.1.093
  5. Occurrence of aphid vector and genetic tolerance to infection by potyvirus in hot pepper vol.172, pp.1, 2010, https://doi.org/10.1007/s10681-009-0052-z
  6. Characterization ofSclerotinia sclerotiorumIsolated from Paprika vol.34, pp.3, 2006, https://doi.org/10.4489/MYCO.2006.34.3.154
  7. First Report of Cactus virus X Infecting Hylocereus undatus in Korea vol.100, pp.12, 2016, https://doi.org/10.1094/PDIS-06-16-0889-PDN
  8. Molecular evidence supporting the confirmation of Maracuja mosaic virus as a species of the genus Tobamovirus and production of an infectious cDNA transcript vol.151, pp.12, 2006, https://doi.org/10.1007/s00705-006-0823-y
  9. Characterization ofFusarium oxysporumIsolated from Paprika in Korea vol.35, pp.2, 2007, https://doi.org/10.4489/MYCO.2007.35.2.091
  10. The Influence of Cover-crop (Vicia tetrasperma) Cultivation on the Occurrence of Major Insect Pests and their Natural Enemies in Pepper, Capsicum annum vol.32, pp.1, 2013, https://doi.org/10.5338/KJEA.2013.32.1.35