DOI QR코드

DOI QR Code

Alteration of The Quaternary Structure of Human UDP-Glucose Dehydrogenase by a Double Mutation

  • Huh, Jae-Wan (Department of Biochemistry and Molecular Biology, University of Ulsan College of Medicine) ;
  • Yang, Seung-Ju (Department of Biomedical Laboratory Science, Konyang University) ;
  • Hwang, Eun-Young (Department of Biochemistry and Molecular Biology, University of Ulsan College of Medicine) ;
  • Choi, Myung-Min (Department of Biochemistry and Molecular Biology, University of Ulsan College of Medicine) ;
  • Lee, Hyun-Ju (Department of Biochemistry and Molecular Biology, University of Ulsan College of Medicine) ;
  • Kim, Eun-A (Department of Biochemistry and Molecular Biology, University of Ulsan College of Medicine) ;
  • Choi, Soo-Young (Department of Biomedical Sciences, Hallym University) ;
  • Choi, Jene (Department of Pathology, University of Ulsan College of Medicine) ;
  • Hong, Hea-Nam (Department of Anatomy and Cell Biology, University of Ulsan College of Medicine) ;
  • Cho, Sung-Woo (Department of Biochemistry and Molecular Biology, University of Ulsan College of Medicine)
  • Published : 2007.09.30

Abstract

There are conflicting views for the polymerization process of human UDP-glucose dehydrogenase (UGDH) and no clear evidence has been reported yet. Based on crystal coordinates for Streptococcus pyogenes UGDH, we made double mutant A222Q/S233G. The double mutagenesis had no effects on expression, stability, and secondary structure. Interestingly, A222Q/S233G was a dimeric form and showed an UGDH activity, although it showed increased $K_m$ values for substrates. These results suggest that Ala222 and Ser233 play an important role in maintaining the hexameric structure and the reduced binding affinities for substrates are attributable to its altered subunit communication although quaternary structure may not be critical for catalysis.

Keywords

References

  1. Balasubramanian, D. and Kumar, C. (1976) Recent studies of the circular dichroism and optical rotatory dispersion of biopolymers. Appl. Spectrosc. Rev. 11, 223-286. https://doi.org/10.1080/05704927608060379
  2. Campbell, R. E., Mosimann, S. C., van de Rijn, I., Tanner, M. E. and Strynadka, N. C. (2000) The first structure of UDP-glucose dehydrogenase reveals the catalytic residues necessary for the two-fold oxidation. Biochemistry 39, 7012-7023. https://doi.org/10.1021/bi000181h
  3. Campbell, R. E., Sala, R. F., van de Rijn, I. and Tanner, M. E. (1997) Properties and kinetic analysis of UDP-glucose dehydrogenase from group A streptococci. Irreversible inhibition by UDP-chloroacetol. J. Biol. Chem. 272, 3416-3422. https://doi.org/10.1074/jbc.272.6.3416
  4. Cumberledge, S. and Reichsman, F. (1997) Glycosaminoglycans and WNTs: Just a spoonful of sugar helps the signal go down. Trends Genet. 13, 421-423. https://doi.org/10.1016/S0168-9525(97)01275-4
  5. Easley, K. E., Sommer, B. J., Boanca, G., Barycki, J. J. and Simpson, M. A. (2007) Characterization of human UDPglucose dehydrogenase reveals critical catalytic roles for lysine 220 and aspartate 280. Biochemistry 46, 369-378. https://doi.org/10.1021/bi061537d
  6. Feingold, D. S. and Franzen, J. S. (1981) Amino acid sequence of the tryptic peptide containing the catalytic-site thiol group of bovine liver uridine diphosphate glucose dehydrogenase. Trends Biochem. Sci. 6, 103-105. https://doi.org/10.1016/0968-0004(81)90038-4
  7. Fersht, A. (1985) Enzyme Structure and Mechanism, pp. 98-120, W.H. Freeman, New York, USA.
  8. Franzen, J. S., Ashcom, J., Marchetti, P., Cardamone, J. J., Jr. and Feingold, D. S. (1980) Induced versus pre-existing asymmetry models for the half-of-the-sites reactivity effect in bovine liver uridine diphosphoglucose dehydrogenase. Biochim. Biophys. Acta 614, 242-255. https://doi.org/10.1016/0005-2744(80)90214-4
  9. Franzen, J. S., Kuo, I., Eichler, A. J. and Feingold, D. S. (1973) UDP-glucose dehydrogenase: Substrate binding stoichiometry and affinity. Biochem. Biophys. Res. Commun. 50, 517-523. https://doi.org/10.1016/0006-291X(73)90870-X
  10. Franzen, J. S., Marchetti, P. S. and Feingold, D. S. (1980) Resonance energy transfer between catalytic sites of bovine liver uridine diphosphoglucose dehydrogenase. Biochemistry 19, 6080-6089. https://doi.org/10.1021/bi00567a021
  11. Franzen, J. S., Marchetti, P. S., Lockhart, A. H. and Feingold, D. S. (1983) Special effects of UDP-sugar binding to bovine liver uridine diphosphoglucose dehydrogenase. Biochim. Biophys. Acta 746, 146-153. https://doi.org/10.1016/0167-4838(83)90068-7
  12. Hacker, U., Lin, X. and Perrimon, N. (1997) The Drosophila sugarless gene modulates Wingless signaling and encodes an enzyme involved in polysaccharide biosynthesis. Development 124, 3565-3573.
  13. Hanahan, D. (1983) Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166, 557-580. https://doi.org/10.1016/S0022-2836(83)80284-8
  14. Huh, J.-W., Lee, H.-J., Choi, M.-M., Yang, S.-J., Yoon, S. Y., Kim, D. W., Kim, S. Y., Choi, S. Y. and Cho, S.-W. (2005) Identification of a UDP-glucose-binding site of human UDPglucose dehydrogenase by photoaffinity labeling and cassette mutagenesis. Bioconjugate Chem. 16, 710-716. https://doi.org/10.1021/bc0500387
  15. Huh, J.-W., Robinson, R. C., Lee, H. S., Lee, J. I., Heo, Y. S., Kim, H. T., Lee, H. J., Cho, S.-W. and Choe, H. (2006) Expression, purification, crystallization, and preliminary X-ray analysis of the human UDP-glucose dehydrogenase. Protein Peptide Lett. 13, 859-862. https://doi.org/10.2174/092986606777841253
  16. Huh, J.-W., Yoon, H.-Y., Lee, H.-J., Choi, W.-B., Yang, S.-J. and Cho, S.-W. (2004) Importance of Gly-13 for the coenzyme binding of human UDP-glucose dehydrogenase. J. Biol. Chem. 279, 37491-37498. https://doi.org/10.1074/jbc.M404234200
  17. Jansen, P. L., Mulder, G. J., Burchell, B. and Bock, K. W. (1992) New developments in glucuronidation research: Report of a workshop on 'glucuronidation, its role in health and disease'. Hepatology 15, 532-544. https://doi.org/10.1002/hep.1840150328
  18. Kim, S. Y., An, J. J., Kim, D. W., Choi, S. H., Lee, S. H., Hwang, S.-I., Kwon, O.-S., Kang, T.-C., Won, M. H., Cho, S.-W., Park, J., Eum, W. S., Lee, K. S. and Choi, S. Y. (2006) Tat-mediated protein transduction of human brain pyridoxine-5-P oxidase into PC12 cells. J. Biochem. Mol. Biol. 39, 76-83. https://doi.org/10.5483/BMBRep.2006.39.1.076
  19. Lapointe, J. and Labrie, C. (1999) Identification and cloning of a novel androgen-responsive gene, uridine diphosphoglucose dehydrogenase, in human breast cancer cells. Endocrinology 140, 4486-4493. https://doi.org/10.1210/en.140.10.4486
  20. Luca, G., Rindi, S. and Rizzotti, M. (1981) Exogenous UDPxylose can inhibit UDP-glucose dehydrogenase activity of cultured human skin fibroblasts. Basic Appl. Histochem. 25, 67-69.
  21. Ordman, A. B. and Kirkwood, S. (1977) Mechanism of action of uridine diphoglucose dehydrogenase. Evidence for an essential lysine residue at the active site. J. Biol. Chem. 252, 1320-1326.
  22. Ridley, W. P., Houchins, J. P. and Kirkwood, S. (1975) Mechanism of action of uridine diphosphoglucose dehydrogenase. Evidence for a second reversible dehydrogenation step involving an essential thiol group. J. Biol. Chem. 250, 8761-8767.
  23. Rizzotti, M., Cambiaghi, D., Gandolfi, F., Rindi, S., Salvini, R. and De Luca, G. (1986) The effect of extracellular matrix modifications on UDP-glucose dehydrogenase activity in cultured human skin fibroblasts. Basic Appl. Histochem. 30, 85-92.
  24. Rossmann, M. G., Liljas, A., Branden, C.-I. and Banaszak, L. J. (1975) Evolutionary and structural relationships among dehydrogenases. in: The Enzymes (Boyer, P., Ed.), pp. 61-102, Academic Press, New York.
  25. Schiller, J. G., Bowser, A. M. and Feingold, D. S. (1973) Partial purification and properties of UDPG dehydrogenase from Escherichia coli. Biochim. Biophys. Acta 293, 1-10. https://doi.org/10.1016/0005-2744(73)90369-0
  26. Sommer, B. J., Barycki, J. J. and Simpson, M. A. (2004) Characterization of human UDP-glucose dehydrogenase. CYS-276 is required for the second of two successive oxidations. J. Biol. Chem. 279, 23590-23596. https://doi.org/10.1074/jbc.M401928200
  27. Spicer, A. P., Kaback, L. A., Smith, T. J. and Seldin, M. F. (1998) Molecular cloning and characterization of the human and mouse UDP-glucose dehydrogenase genes. J. Biol. Chem. 273, 25117-25124. https://doi.org/10.1074/jbc.273.39.25117
  28. Stryer, L. (1965) The interaction of naphthalene dye with apomyoglobin and apohemoglobin. A fluorescent probe of nonpolar binding sites. J. Mol. Biol. 13, 82-495.
  29. Studier, F. W. and Moffatt, B. A. (1986) Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J. Mol. Biol. 189, 113-130. https://doi.org/10.1016/0022-2836(86)90385-2
  30. Yang, J. T., Wu, C.-S. C. and Martinez, H. M. (1986) Calculation of protein conformation from circular dichroism. Methods Enzymol. 130, 208-269. https://doi.org/10.1016/0076-6879(86)30013-2

Cited by

  1. Evaluation of toxicological biomarkers in secreted proteins of HepG2 cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin and their expressions in the plasma of rats and incineration workers vol.1864, pp.5, 2016, https://doi.org/10.1016/j.bbapap.2016.02.018
  2. Structure and Mechanism of Human UDP-glucose 6-Dehydrogenase vol.286, pp.27, 2011, https://doi.org/10.1074/jbc.M111.234682
  3. Computational analysis of the quaternary structural changes induced by point mutations in human UDP-glucose dehydrogenase vol.486, pp.1, 2009, https://doi.org/10.1016/j.abb.2009.03.017
  4. Glycation of Liver Cystatin: Implication on its Structure and Function vol.26, pp.5, 2016, https://doi.org/10.1007/s10895-016-1866-4