DOI QR코드

DOI QR Code

Distribution of Telomeric DNA in Korean Native Chicken Chromosomes

한국 재래닭 염색체의 텔로미어 분포 양상

  • Sohn, Sea-Hwan (Department of Animal Science & Biotechnology, Jinju National University) ;
  • Cho, Eun-Jeong (Department of Animal Science & Biotechnology, Jinju National University)
  • 손시환 (진주산업대학교 동물생명과학과) ;
  • 조은정 (진주산업대학교 동물생명과학과)
  • Received : 2010.08.13
  • Accepted : 2010.08.31
  • Published : 2010.09.30

Abstract

Telomeres are nucleoprotein structures at the ends of chromosomes consisting of DNA sequences arranged in tandemly repeated units $(TTAGGG)_n$. However, this hexamers can also occur at non-telomeric sites in some avians and vertbrate. This study was carried out to present the distribution of telomeric DNA sequences in Korean Native Chicken chromosomes. The fluorescence in situ hybridization technique using a telomeric DNA probe was performed to the metaphase spreads of chicken early embryonic cells. Telomeric DNA signals were detected at the ends of chromosomes including macrochromosomes and microchromosomes. In chicken, surprisingly, chromosome 1 showed very distinct interstitial telomeric DNA hybridization patterns which located two interstitial sites in the p-arm at 1p11 and 1p23, and one in the q-arm at 1q32. In chromosome number 2 and 3 also displayed interstitial telomeric signals (ITS) in the long arms at 2q24 and 3q32, respectively. The pattern of telomeric DNA distribution in Korean Native Chicken chromosomes was in agreement with a previously reported in Gallus domesticus. The relative amount of telomeric DNA sequences in each macrochromosomes ranged from 4.6% to 16.3%. Distribution of telomeric DNAs at the end of p-arm was much more than that of q-arm in almost chicken chromosomes. The distribution of ITS in chicken chromsomes implicate to tandem chromosome fusions that might have occurred during the process of karyotype evolution.

텔로미어(telomere)는 염색체 양 말단에 위치하는 DNA와 단백질의 복합체로서 (TTAGGG)n의 단순 반복 염기 서열로 이루어져 있다. 그러나 일부 조류 및 척추동물의 경우 염색체의 양 말단 부위외 간질적 위치에도 telomeric DNA sequence가 분포한다. 본 연구는 닭 염색체에 있어 telomeric DNA의 분포 양상을 제시하고자 한국 재래닭의 초기 배아로부터 염색체 표본을 제작하고, telomeric DNA probe를 이용한 FISH를 수행하여 염색체 상 텔로미어의 분포 양상을 분석하였다. 분석 결과, 닭의 모든 염색체 양 말단부에 텔로미어가 분포하는 것으로 나타났으며, 더불어 대형 염색체 중 1번의 1q32, 1p11, 1p23 위치와 2번 염색체의 2q24 및 3번 염색체 3q32에 interstitial telomeric signal(ITS)이 존재하는 것이 확인되었다. 이러한 한국 재래닭 염색체의 텔로미어 분포 양상은 이전 Gallus domesticus에서 발표한 분포 양상과 거의 일치한 것으로 나타났다. 한국 재래닭의 각 염색체별 텔로미어 함유율은 4.6~16.3% 정도로 분석되었으며, 거의 대부분의 염색체에서 단완 말단부의 telomeric DNA의 함량이 장완 말단부보다 높은 것으로 나타났다. 닭 염색체에서 ITS의 존재와 분포 양상은 핵형학적으로 진화 과정 중 염색체 간의 융합에 의해 신생 염색체가 형성되었을 가능성을 시사한다.

Keywords

References

  1. Abuín M, Martínez P, Sánchez L 1996 Localization of the repetitive telomeric sequence (TTAGGG)n in four salmonid species. Genome 39(5):1035-1038. https://doi.org/10.1139/g96-129
  2. Blackburn EH 1991 Structure and function of telomere. Nature 350:569-573. https://doi.org/10.1038/350569a0
  3. Blackburn EH, Gall JG 1978 A tandemly repeated sequence at the termini of the extrachromosomal ribosomal RNA genes in Tetrahymena. Mol Biol 120(1):33-53. https://doi.org/10.1016/0022-2836(78)90294-2
  4. Bloom SE, Delany ME, Muscarella DM 1993 Constant and variable features of avian chromosomes. pp 39-59 In:Manipulation of the Avian Genome. Etches RJ and Verrinder Gibbins AM, CRC Press Inc, Boca Raton, FL.
  5. Bolzan AD, Bianchi MS 2006 Telomeres, interstitial telomeric repeat sequences, and chromosomal aberrations. Mutat Res 612:189-214. https://doi.org/10.1016/j.mrrev.2005.12.003
  6. Delany ME, Daniels LM, Swanberg SE, Taylor HA 2003 Telomeres in the chicken: genome stability and chromosome ends. Poultry Sci 82(6):917-926. https://doi.org/10.1093/ps/82.6.917
  7. Delany ME, Krupkin AB, Miller MM 2000 Organization of telomere sequences in bird: evidence for arrays of extreme length and for in vivo shortening. Cytogenet Cell Genet 90: 139-145. https://doi.org/10.1159/000015649
  8. Faragher RG, Kipling D 1998 How might replicative senescence contribute to human ageing? Bioessays 20:985-991. https://doi.org/10.1002/(SICI)1521-1878(199812)20:12<985::AID-BIES4>3.3.CO;2-1
  9. Gan Y, Engelke KJ, Brown CA, Au JL 2001 Telomere amount and length assay. Pharma Res 18(12):1655-1659. https://doi.org/10.1023/A:1013306109801
  10. Harley CB 1991 Telomere loss: Mitotic clock or genetic time bomb? Mutat Res 256:271-282. https://doi.org/10.1016/0921-8734(91)90018-7
  11. Harley CB, Futcher AB, Greider CW 1990 Telomeres shorten during ageing of human fibroblasts. Nature 345:458-460. https://doi.org/10.1038/345458a0
  12. Hastie ND, Allshire RC 1989 Human telomeres: Fusion and interstitial sites. Trends Genet 5:326-331. https://doi.org/10.1016/0168-9525(89)90137-6
  13. Kipling D, Cooke HJ 1990 Hypervariable ultra-long telomeres in mice. Nature 347:400-402. https://doi.org/10.1038/347400a0
  14. Kozik A, Bradbury EM, Zalensky Z 1998 Increased telomere size in sperm cells of mammals with long terminal (TTAGGG)n arrays. Mol Reprod Dev 51:98-104. https://doi.org/10.1002/(SICI)1098-2795(199809)51:1<98::AID-MRD12>3.0.CO;2-Q
  15. Ladjali-Mohammedi K, Bitgood JJ, Tixier-Boichard M, Ponce de Leon FA 1999 International system for standardized avian karyotypes (ISSAK): Standardized banded karyotypes of the domestic fowl (Gallus domesticus). Cytogenet Cell Genet 86:271-276. https://doi.org/10.1159/000015318
  16. Law HKW, Lau YU 2001 Validation and development of quantitative flow cytometry-based fluorescence in situ hybridization for intercenter comparison of telomere length measurement. Cytometry 43:150-153. https://doi.org/10.1002/1097-0320(20010201)43:2<150::AID-CYTO1030>3.0.CO;2-H
  17. Lee C, Sasi R, Lin CC 1993 Interstitial localization of telomeric DNA sequences in the Indian muntjac chromosomes: further evidence for tandem chromosome fusions in the karyotypic evolution of the Asian muntjacs. Cytogenet Cell Genet 63(3):156-159. https://doi.org/10.1159/000133525
  18. Lejnine S, Vladimir L, Langmore JP 1995 Conserved nucleoprotein structure at the ends of vertebrate and invertebrate chromosomes. Proc Natl Acad Sci USA 92:2393-2397. https://doi.org/10.1073/pnas.92.6.2393
  19. Levan A, Fredga K, Sandberg AA 1964 Nomenclature for centromeric on chromosomes. Hereditas 52:201-220. https://doi.org/10.1111/j.1601-5223.1964.tb01953.x
  20. Meyne J, Baker RJ, Hobart HH, Hsu TC, Ryder OA, Ward OG, Wiley JE, Wurster-Hill DH, Yates TL, Moyzis RK 1990 Distribution of non-telomeric sites of the $(TTAGGG)_n$ telomeric sequence in vertebrate chromosomes. Chromosoma 99(1):3-10. https://doi.org/10.1007/BF01737283
  21. Meyne J, Moyzis RK 1994 In situ hybridization using synthetic oligomers as probes for centromere and telomere repeats. Methods Mol Biol 33:63-74.
  22. Nanda I, Schmid M 1994 Localization of the telomeric $(TTAGGG)_n$ sequence in chicken (Gallus domesticus) chromosomes. Cytogenet Cell Genet 65(3):190-193. https://doi.org/10.1159/000133630
  23. Nanda I, Schrama D, Feichtinger W, Haaf T, Schrtl M, Schmid M 2002 Distribution of telomeric $(TTAGGG)_n$ sequences in avian chromosomes. Chromosoma 111:215-227. https://doi.org/10.1007/s00412-002-0206-4
  24. Ohno S 1961 Sex chromosomes and microchromosomes of Gallus domesticus. Chromosoma 11:484-498.
  25. Pollock BJ, Fechheimer NS 1976 The chromosome number of Gallus domesticus. Br Poult Sci 17:39-42. https://doi.org/10.1080/00071667608416247
  26. Poon SS, Martens UM, Ward RK, Lansorp PM 1999 Telomere length measurements using digital fluorescence microscopy. Cytometry 36:267-278. https://doi.org/10.1002/(SICI)1097-0320(19990801)36:4<267::AID-CYTO1>3.0.CO;2-O
  27. Rufer N, Dragowska W, Thornbury G, Roosnek E, Lansdorp PM 1998 Telomere length dynamics in human lymphocyte subpopulations measured by flow cytometry. Nat Biotechnol 16(8):743-747. https://doi.org/10.1038/nbt0898-743
  28. Santani A, Raudsepp T, Chowdhary BP 2002 Interstitial telomeric sites and NORs in Hartmann's zebra (Equus zebra hartmannae) chromosomes. Chromosome Res 10(7):527- 534. https://doi.org/10.1023/A:1020945400949
  29. Shay JW 1999 At the end of the millennium, a view of the end. Science 288:1377-1379. https://doi.org/10.1126/science.288.5470.1377
  30. Slijepcevic P 2001 Telomere length measurement by Q-FISH. Cell Science 23:17-22. https://doi.org/10.1023/A:1013177128297
  31. Sohn SH, Cho EJ, Son WJ, Lee CY 2007 Diagnosis of bovine freemartinism by fluorescence in situ hybridization on interphase nuclei using a bovine Y chromosome-specific DNA probe. Theriogenology 68:1003-1011. https://doi.org/10.1016/j.theriogenology.2007.06.022
  32. Venkatesan RN, Price C 1998 Telomerase expression in chicken constitutive activity in somatics tissues and down-regulation in culture. Proc Natl Acad Sci USA 95:14763- 14768. https://doi.org/10.1073/pnas.95.25.14763
  33. Weng NP, Hodes RJ 2000 The role of telomerase exprerssion and telomere length maintenance in human and mouse. J Clin Immunol 20(4):257-267. https://doi.org/10.1023/A:1017223602293
  34. Wiley JE, Meyne J, Little ML, Stout JC 1992 Interstitial hybridization sites of the $(TTAGGG)_n$ telomeric sequence on the chromosomes of some North American hylid frogs. Cytogenet Cell Genet 61:55-57. https://doi.org/10.1159/000133368
  35. Wnuk M, Bugno M, Slota E 2008 Application of primed in situ DNA synthesis (PRINS) with telomere human commercial kit in molecular cytogenetics of Equus caballus and Sus scrofa scrofa. Folia Histochemica et Cytobiologica 46:85-88. https://doi.org/10.2478/v10042-008-0012-9
  36. Wright WE, Tesmer VM, Huffman KE, Levene SD, Shay JW 1997 Normal human chromosomes have long G-rich telomeric overhangs at one end. Gen Dev 11:2801-2809. https://doi.org/10.1101/gad.11.21.2801
  37. Zakian VA 1995 Telomeres: beginning to understand the end. Science 270:1601-1607. https://doi.org/10.1126/science.270.5242.1601
  38. 백규흠 이철영 상병돈 최철환 김학규 손시환 2003 한국재래계의 염색체 분염 표지 분석. 한국동물자원과학회지 45(1):1-12. https://doi.org/10.5187/JAST.2003.45.1.001
  39. 손시환 류은경 백규흠 2000 닭 초기배자로부터 염색체 분리 기법의 개발 : Ethidium bromide를 이용한 고정도 염색체의 유도. 한국동물자원과학회지 42(2):157-164.
  40. 손시환 오봉국 1987 닭 염색체의 수 및 형태적 고찰. 한국축산학회지 29:524-531.
  41. 손시환, Multani AS, Pathak S 2004 소, 돼지 염색체의 telomeric DNA 분포양상. 한국동물자원과학회지 46(4):547-554.

Cited by

  1. Inheritance and Heritability of Telomere Length in Chicken vol.41, pp.3, 2014, https://doi.org/10.5536/KJPS.2014.41.3.217
  2. Dynamics of telomere length in the chicken vol.70, pp.04, 2014, https://doi.org/10.1017/S0043933914000804