DOI QR코드

DOI QR Code

Simultaneous Detection of Staphylococcus aureus, Salmonella enterica subsp., Vibrio parahaemolyticus by Multiplex Polymerase Chain Reaction

Multiplex Polymerase Chain Reaction(PCR)법을 이용한 Staphylococcus aureus, Salmonella enterica subsp., Vibrio parahaemolyticus의 다중동시검출

  • 정유석 ((재)대구테크노파크 바이오산업지원센터) ;
  • 정희경 ((재)대구테크노파크 바이오산업지원센터) ;
  • 전원배 (대구경북과학기술원) ;
  • 서화정 (대구경북과학기술원) ;
  • 홍주헌 (대구가톨릭대학교 외식식품산업학부)
  • Published : 2010.04.30

Abstract

This study was conducted to detect and identify Staphylococcus aureus, Vibrio parahaemolyticus, and Salmonella enterica subsp. using simultaneous multiplex polymerase chain reaction (multiplex PCR) assay. 23S rRNA partial gene (S. aureus), tox R gene (V. parahaemolyticus), and inv A gene (S. enterica subsp.) as diagnostic marker gene were suggested, and their amplicon sizes were 482 bp, 368 bp, and 284 bp, respectively. Non specific amplicons by STA-5F/STA-5R primer, ToxR-F/ToxR-R primer, and 139/141 primer were not observed in genomic DNA of pathogen bacteria as Bacillus cereus, Listeria monocytogenes, Escherichia coli, Proteus vulgaris, Streptococcus pyogenes, Candida albicans, and Shigella sonnei. The extracted crude DNA of targeted bacteria was detected as PCR template successfully. The detection limits were $10^5\sim10^4$ CFU/mL and 10 pg of purified genomic DNA of S. aureus, V. parahaemolyticus, and S. enterica subsp. by using simultaneous multiplex PCR.

본 연구는 국내 주요 식중독 원인균인 Staphylococcus aureus, Salmonella enterica subsp., Vibrio parahaemolyticus를 동시에 검출 및 동정할 수 있는 simultaneous multiplex PCR방법을 개발하고자 하였다. S. aureus의 23s rRNA 유전자(482 bp), V. Parahaemolyticus의 toxR 유전자(368 bp), S. enterica subsp.의 invA 유전자(284 bp)를 특이적으로 검출 및 동정할 수 있는 3개 primer set 즉, STA-5F/STA-5R, ToxR-F/ToxR-R, 139/141을 구축하였으며, 그 결과 정제되어진 각 식중독 원인균의 genomic DNA를 template로 하여 세 균주 모두 10 pg까지 다중동시검출이 가능하였다. 생균수(CFU)와 상응되는 검출한계 결과로써 $10^1\sim10^2$ CFU/reaction의 검출한계를 보였으며 이는 즉, S. aureus $6.0\times10^4$ CFU/mL, S. enterica subsp. $9.5\times10^4$ CFU/mL, V. parahaemolyticus $6.1\times10^5$ CFU/mL의 검출한계를 나타내었다. 균체회수부터 agarose gel 상에서 검출 및 동정까지 3~4 hr의 시간 소요로 single tube 반응으로 세 식중독 원인균의 다중동시검출이 가능하였다. 또한 추가적인 연구를 통하여 세 식중독 원인균주의 검출을 위한 향상된 민감도를 가지는 multiplex PCR법 및 real time PCR을 이용한 다중동시검출법 개발을 위한 기초자료로서 활용 가능할 것이라 사료된다.

Keywords

References

  1. Lee HJ. 2008. Pathogenic agents and outbreak of foodborne diseases at home and abroad. Kor J Vet Publ Hlth 32: 81-89.
  2. Jung HJ, Cho JI, Park SH, Ha SD, Lee KH, Kim CH, Song ES, Chung DH, Kim MG, Kim KY, Kim KS. 2005. Genotype and phenotype characteristics of Staphylococcus aureus isolates from lettuces and raw milk. Korean J Food SciTechnol 37: 134-141.
  3. Ingeborg H, Angelika L, Petra R, Kurt K, Ernst B, Marti W. 2001. Comparison of different approaches to quantify Staphylococcus aureus cells by real-time PCR and quantitative PCR and application of this technique for examination of cheese. Appl Environ Microbiol 67: 3122-3126. https://doi.org/10.1128/AEM.67.7.3122-3126.2001
  4. Le Loir Y, Baron F, Gautier M. 2003. Staphylococcus aureus and food poisoning. Genet Mol Res 2: 63-76.
  5. Yeh KS, Chen TH, Liao CW, Chang CS, Lo HC. 2002. PCR amplification of the Salmonella typhimurium fim Y gene sequence to detect the Salmonella species. Int J Food Microbiol 78: 227-234. https://doi.org/10.1016/S0168-1605(02)00115-0
  6. Chiu TH, Chen TR, Hwang WZ, Tsen HY. 2005. Sequencing of an internal transcribed spacer region of 16S-23S rRNA gene and designing of PCR primers for the detection of Salmonella spp. in food. Int J Food Microbiol97: 259-265. https://doi.org/10.1016/j.ijfoodmicro.2004.04.005
  7. Jung SJ, Kim HJ, Kim HY. 2005. Quantitative detection of Samonella typhimurium contamination in milk, using real time PCR. J Microbiol Biotechnol 15: 1353-1358.
  8. Park HJ, Kim HH, Park SH, Shin EG, Kim JH, Kim HY. 2008. Direct and quantitative analysis of Salmonella enterica serovar typhimurium using real time PCR from artificially contaminated chicken meat. J Microbiol Biotechnol18: 1453-1458.
  9. Oh EK, Yu HS, Shin SB, Son KR, Park KB, Kwon JY, Lee TS, Lee HJ. 2008. Trimethoprim resistance of Vibrio parahaemolyticus isolated from the fish farm. J Kor Fish Soc 41: 324-329. https://doi.org/10.5657/kfas.2008.41.5.324
  10. di Pinto A, Ciccarese G, de Corato R, Novello L, Terio V.2008. Detection of pathogenic Vibrio parahaemolyticus in southern Italian shelfish. Food Control 19: 1037-1041. https://doi.org/10.1016/j.foodcont.2007.10.013
  11. Kim MM, Oh MH, Lee GY, Hwang IG, Kwak HS, Kang YS, Koh YH, Jun HK, Kwong KS. 2008. Analysis of major food borne pathogens in various foods in Korea. Food Sci Biotechnol 17: 483-488.
  12. Choi KY, Kim BS, Bae WS, Jung WS, Cho YJ. 2008.Developing the index of foodborne disease occurrence.Korean J Appl Statist 21: 649-658. https://doi.org/10.5351/KJAS.2008.21.4.649
  13. Adndreja R, Benaissa EM, Mieke U, Philippe B, Willy Z,Ernst H, Ellen F, Johan D. 2006. Immunoquantitative real time PCR for detection and quantification of Staphylococcus aureus enterotoxin B in foods. Appl Environ Mircobiol 72: 16593-16599.
  14. Kwak HS, Lee DH, Moon HS, Park JS, Woo GJ, Kim CM. 2003. Evaluation of the efficiency of E. coli O157:H7 rapid detection kit using immunochromatography. J Fd Hyg Safety 18: 118-124.
  15. Kim MH, Kim WJ, Sin WS, Son DH, Cha SG. 2003. Feasibility study on the use of liposomes for detecting food-borne pathogenic bacteria. Korean J Food Sci AniResour 23: 278-283.
  16. Jung HJ, Cho JI, Song ES, Kim JJ, Kim KS. 2005. PCR detection of virulence genes encoding coagulase and other toxins among clinical methicillin-resistant Staphylococcus aureus isolates. Kor J Microbiol Biotechnol 33: 207-214.
  17. Lim JS, Yoon JH, Min BK, Hong KW. 2008. Detection and identification of shiga-like toxin producing Escherichia coli O157:H7 by multiplex PCR. Food Eng Prog 12: 8-14.
  18. Jeong SH, Kim MY, Kim HJ, Kim TU, Yu SL, Kim HY.2003. Rapid detection of Salmonella species in foods using PCR. J Korean Soc Agric Chem Biotechnol 46: 225-228.
  19. Han KH, Lee CW, Lee YS, Yang OS, Lim YK, Yoon BS. 2001. Application of multiplex PCR using Lis-mix primers in food test and specific detection of Listeria ivanovii . J Fd Hyg Safety 16: 251-257.
  20. Seo HA, Park SH, Kim GS. 2003. Optimization of the concentrations of ERIC-PCR components to simultaneously differentiate five foodborne pathogenic bacterial genera. J Fd Hyg Safety 18: 229-236.
  21. Kim SS, Lee HM, Lee JB. 2003. Molecular epidemiological characteristics of Vibrio parahaemolyticus as recently wilde-spreaded in Korea. Korean J Biotechnol Bioeng 18:522-528.
  22. Yoon JH, Lee SJ. Hong KW. 2008. A multiplex PCR Assay for the direct detection of Salmonella spp., Yersinia enterocolitica, and Staphylococcus aureus in Food. Food Eng Prog 12: 24-31.
  23. Park SH, Kim HJ, Kim HY. 2006. Simultaneous detection of Yersinia enterocolitica, Staphylococcus aureus, and Shigella spp. in lettuce using multiplex PCR method. J Microbiol Biotechnol 16: 1301-1305.

Cited by

  1. Development of a Novel PCR Primer for Detection of Staphylococcus aureus vol.49, pp.1, 2015, https://doi.org/10.14397/jals.2015.49.1.147
  2. Rapid Detection for Salmonella spp. by Ultrafast Real-time PCR Assay vol.33, pp.1, 2018, https://doi.org/10.13103/JFHS.2018.33.1.50
  3. Multiplex PCR for the rapid detection of insulin-like growth factor in the Pacific oyster, Crassostrea gigas: a useful indicator for growth assessment vol.46, pp.1, 2010, https://doi.org/10.1007/s11033-018-4559-z