DOI QR코드

DOI QR Code

Application of DNA marker related with marbling score in Hanwoo cow

한우 암소에서 근내지방도 관련 DNA 마커의 활용

  • Lee, Yoonseok (Institute of Green Bio Science & Technology, Seoul National University)
  • 이윤석 (서울대학교 그린바이오과학기술연구원)
  • Received : 2016.04.27
  • Accepted : 2016.05.09
  • Published : 2016.05.31

Abstract

The aim of this study was to evaluate combination of each of g.15532 C>A, g.17924 G>A SNP of FASN gene and beef quality grade of progeny in Hanwoo cow. In order to analyze the SNPs, genomic DNA was obtained from 270 Hanwoo cow and their progeny steer and g.15532 C>A and g.17924 G>A SNP was genotyped using single-based extension. Employing GLM as a statistical model. g.15532 C>A and g.17924 G>A SNP have a significant effect in Hanwoo steer but no significant effect in Hanwoo cow. Combination of each of g.15532 C>A, g.17924 G>A SNP and beef quality grade of progeny have a significant effect on marbling score in Hanwoo cow. Therefore, we suggest that g.15532 C>A and g.17924 G>A SNP contribute to genetic improvement on marbling score in Hanwoo cow.

본 연구는 이미 한우에서 검증된 지방산 합성 효소 유전자의 g.15532 C>A, g.17924 G>A 단일염기다형성과 암소의 후대들 중 거세우의 도체성적을 이용하여 유전자 활용에 대한 방안을 모색하고자 한다. 이 단일염기다형성의 유전자형을 분석하기 위해 경북지역에서 사육된 암소 270두와 이들의 후대들 중 도체성적이 있는 거세우 270두의 게놈 DNA를 추출하여 단일염기확장법으로 유전자형을 분석하였다. 본 연구에 사용된 통계모델은 GLM의 ANCOVA 방식을 사용하였다. 한우 거세우와 암소집단에서 g.15532 C>A와 g.17924 G>A 단일염기다형성들과 근내지방도간 연관분석을 한결과 거세우집단에서 근내지방도와 유의적인 차이를 나타내었지만 암소집단에서는 유의적인 차이를 나타내지 않았다. 하지만 일반 한우농가에서 개량하는 있는 방식인 후대검정우 등급판정 결과를 이용하여 이 단일염기다형성과 분석한 결과 암소 집단에서 유의적인 차이를 나타내었다. 따라서 g.15532 C>A와 g.17924 G>A 단일염기다형성은 한우 암소 개량에 있어 후대검정우 등급판정결과와 조합하여 사용할 경우 근내지방도 개량에 효율적인 선발 보조도구 활용가치가 높을 것이라 판단되어진다.

Keywords

References

  1. Abe, T., Saburi, J., Hasebe, H., Nakagawa, T., Misumi, S., Nade, T., Nakajima, H., Shoji, N., Kobayashi, M. and Kobayashi, E. (2009). Novel mutation of the FASN gene and their effect on fatty acid composition in Japanese Black beef. Biochemical Genetics, 47, 397-411. https://doi.org/10.1007/s10528-009-9235-5
  2. Cho, Y. M., Lee, S. H., Park, E. W., Kim, N., Lim, K. D., Kim, K. H., Park, B. Y., Lee, C. S., Oh, S. J., Kim, T. H. and Yoon, D. H. (2010). Association of -867G>C, -877G>del and exon 5 GT polymorphism in the stearoyl-coa desaturase gene with fatty acid composition in the muscle of Hanwoo (Korean cattle). Korean Journal for Food Science of Animal Resources, 4, 655-660.
  3. Heo, K. N., Kim, N. K., Lee, S. H., Kim, N. Y., Jeon, J. T., Park, E. W., Oh, S. J., Kim, T. H., Seong, H. H. and Yoon. D. (2011). Association between the polymorphism of the fatty acid binding protein 5 (FABP5) gene within the BTA 14 QTL region and carcass/meat quality traits in Hanwoo. Journal of Animal Science and Technology, 53, 311-317. https://doi.org/10.5187/JAST.2011.53.4.311
  4. Jin, M.-H., Oh, D.-Y. and Lee, J.-Y. (2013). Major gene identification for LPL gene in Korean cattles. Journal of the Korean Data & Information Science Society, 24, 1331-1339. https://doi.org/10.7465/jkdi.2013.24.6.1331
  5. Kim, B.-D., Kim, H.-J., Lee, S.-W. and Lee, J.-Y. (2014). Major gene identification for FASN gene in Korean cattles by data mining. Journal of the Korean Data & Information Science Society, 25, 1385-1395. https://doi.org/10.7465/jkdi.2014.25.6.1385
  6. Kim, B. S., Kim, S. C., Park, C. M., Lee, S. H., Cho, Y. M., Kim, N. K., Jang, G. W., Yoon, D. H., Yang, B. S., Hong, S. K., Seong, H. H. and Choi, B. H. (2013). Genetic polymorphisms of the bovine gene are significantly associated with carcass traits in Korean Cattle. Asian-Australasian Journal of Animal Science, 20, 780-787.
  7. Kim, B. S., Kim, N. K., Lee, S. H., Cho, Y. M., Heo, K. N., Park, E. W., Yang, B. K. and Yoon, D. (2011). Association study between the polymorphisms of exostosin-1 gene and economic traits in Hanwoo. Journal of Animal Science and Technology, 53, 7-13 https://doi.org/10.5187/JAST.2011.53.1.7
  8. Kim, N. K., Cho, S. H., Lee, S. H., Park, H. R., Lee, C. S., Cho, Y. M., Choy, Y. H., Yoon, D., Im S. K. and Park, E. W. (2008). Proteins in longissimus muscle of Korean native cattle and their relationship to meat quality. Meat Science, 80, 1068-1073. https://doi.org/10.1016/j.meatsci.2008.04.027
  9. Kim, N. K., Kim, G. S., Jung, Y. S., Moon, H. J., Cho, Y. M. and Yoon, D. (2009). Association study between polymorphisms of inositol 1,4,5-triphosphate receptor type 1 (IP3R1) gene and carcass traits in Korean cattle (Hanwoo). Journal of Animal Science and Technology, 51, 289-294. https://doi.org/10.5187/JAST.2009.51.4.289
  10. Lee, H. J., Lee, S. H., Cho, Y. M., Yoon, H. B., Jeon, B. K., Oh, S. J., Kwon, M. S. and Yoon, D. (2004). Association between the polymorphism on intron 5 of the lipoprotein lipase gene and carcass traits in Hanwoo (Korean cattle). Journal of Animal Science and Technology, 46, 947-956. https://doi.org/10.5187/JAST.2004.46.6.947
  11. Lee, S. H., van der Werf, J. H. Lee, S. H. Park, E. W. Oh, S. J. Gibson, J. P. and Thompson, J. M. (2010). Genetic polymorphisms of the bovine fatty acid binding protein 4 gene are significantly associated with marbling and carcass weight in Hanwoo (Korean cattle). Animal Genetics, 41, 442-444.
  12. Oh, D., Lee, Y., La, B., Yeo, J., Chung, E., Kim, Y. and Lee, C. (2012). Fatty acid composition of beef is associated with exonic nucleotide variants of the gene encoding FASN. Molecular Biology Reports, 39, 4083-4090. https://doi.org/10.1007/s11033-011-1190-7