References
- Ash, C., Priest, F.G., and Collins, M.D. 1993. Molecular identification of rRNA group 3 bacilli (Ash, Farrow, Wallbanks and Collins) using a PCR probe test. Proposal for the creation of a new genus Paenibacillus. Antonie van Leeuwenhoek 64, 253-260.
- Buck, J.D. 1982. Nonstaining (KOH) method for determination of Gram reactions of marine bacteria. Appl. Environ. Microbiol. 44, 992-993.
- Choi, J.H., Im, W.T., Yoo, J.S., Lee, S.M., Moon, D.S., Kim, H.J., Rhee, S.K., and Roh, D.H. 2008. Paenibacillus donghaensis sp. nov., a xylan-degrading and nitrogen-fixing bacterium isolated from East Sea sediment. J. Microbiol. Biotechnol. 18, 189-193.
- Chung, Y.R., Kim, C.H., Hwang, I., and Chun, J. 2000. Paenibacillus koreensis sp. nov., a new species that produces an iturin-like antifungal compound. Int. J. Syst. Evol. Microbiol. 50, 1495-1500. https://doi.org/10.1099/00207713-50-4-1495
- De Vos, P., Ludwig, W., Schleifer, K.H., and Whitman, W.B. 2009. Family IV. Paenibacillaceae fam. nov. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 3 (The Firmicutes), pp. 269. In De Vos, P., Garrity, G.M., Jones, D., Krieg, N.R., Ludwig, W., Rainey, F.A., Schleifer, K.H., and Whitman, W.B. (eds.) Springer, New York, USA.
- Euzeby, J.P. 1997. List of bacterial names with standing in nomenclature: a folder available on the Internet. Int. J. Syst. Bacteriol. 47, 590-592. (List of prokaryotic names with standing in nomenclature. http://www.bacterio.net). https://doi.org/10.1099/00207713-47-2-590
- Ezaki, T., Hashimoto, Y., and Yabuuchi, E. 1989. Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int. J. Syst. Bacteriol. 39, 224-229. https://doi.org/10.1099/00207713-39-3-224
- Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17, 368-376. https://doi.org/10.1007/BF01734359
- Fleming, H.P., Etchells, J.L., and Costilow, R.N. 1975. Microbial inhibition by an isolate of Pediococcus from cucumber brines. Appl. Microbiol. 30, 1040-1042.
- Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41, 95-98.
- Heimbrook, M.E., Wang, W.L., and Campbell, G. 1989. Staining bacterial flagella easily. J. Clin. Microbiol. 27, 2612-2615.
- Hiraishi, A., Ueda, Y., Ishihara, J., and Mori, T. 1996. Comparative lipoquinone analysis of influent sewage and activated sludge by high performance liquid chromatography and photodiode array detection. J. Gen. Appl. Microbiol. 42, 457-470. https://doi.org/10.2323/jgam.42.457
- Kajimura, Y. and Kaneda, M. 1996. Fusaricidin A, a new depsipeptide antibiotic produced by Bacillus polymyxa KT-8. Taxonomy, fermentation, isolation, structure elucidation and biological activity. J. Antibiot. (Tokyo) 49, 129-135. https://doi.org/10.7164/antibiotics.49.129
- Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16, 111-120. https://doi.org/10.1007/BF01731581
- Kluge, A.G. and Farris, J.S. 1969. Quantitative phyletics and the evolution of anurans. Syst. Zool. 18, 1-32. https://doi.org/10.2307/2412407
- Kumar, S., Stecher, G., and Tamura, K. 2016. MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Mol. Biol. Evol. 33, 1870-1874. https://doi.org/10.1093/molbev/msw054
- Kurusu, K., Ohba, K., Arai, T., and Fukushima, K. 1987. New peptide antibiotics LI-F03, F04, F05, F07, and F08, produced by Bacillus polymyxa. I. Isolation and characterization. J. Antibiot. (Tokyo) 40, 1506-1514. https://doi.org/10.7164/antibiotics.40.1506
- Larkin, M.A., Balckshields, G., Brown, N.P., Chenna, R., McGettigan, P.A., McWilliam, H., Valentin, F., Wallace, I.M., Wilm, A., Lopez, R., et al. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23, 2947-2948. https://doi.org/10.1093/bioinformatics/btm404
- Mesbah, M. and Whitman, W.B. 1989. Measurement of deoxyguanosine thymidine ratios in complex mixtures by high-performance liquid chromatography for determination of the mole percentage guanine + cytosine of DNA. J. Chromatogr. 479, 297-306. https://doi.org/10.1016/S0021-9673(01)83344-6
- Nakajima, N., Chihara, S., and Koyama, Y. 1972. A new antibiotic, gatavalin. I. Isolation and characterization. J. Antibiot. (Tokyo) 25, 243-247. https://doi.org/10.7164/antibiotics.25.243
- Pichard, B., Larue, J.P., and Thouvenot, D. 1995. Gavaserin and saltavalin, new peptide antibiotics produced by Bacillus polymyxa. FEMS Microbiol. Lett. 133, 215-218. https://doi.org/10.1111/j.1574-6968.1995.tb07887.x
- Saitou, N. and Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
- Sasser, M. 1990. Identification of bacteria by gas chromatography of cellular fatty acids. MIDI Technical Note 101. MIDI Inc., Newark, DE, USA.
- Schaeffer, A.B. and Fulton, M.D. 1933. A simplified method of staing endospores. Science 77, 194. https://doi.org/10.1126/science.77.1990.194
- Schleifer, K.H. and Kandler, O. 1972. Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol. Rev. 36, 407-477.
- Shida, O., Takagi, H., Kadowaki, K., Nakamura, L.K., and Komagata, K. 1997. Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus. Int. J. Syst. Bacteriol. 47, 289-298. https://doi.org/10.1099/00207713-47-2-289
- Slepecky, R. and Hemphill, E. 1992. The genus Bacillus-nonmedical. The Prokaryotes, 2nd edn, pp. 1663-1696. In Balows, A., Truper, H.G., Dworkin, M., Harder, W., and Schleifer, K.H. (eds.). Springer, New York, USA.
- Smibert, R.M. and Krieg, N.R. 1994. Phenotypic characterization. Methods for General and Molecular Bacteriology, pp. 607-655. In Gerhardt, P., Murray, R.G.E., Wood, W.A., and Krieg, N.R. (eds.). American Society for Microbiology, Washington, DC, USA.
- Vogler, K. and Studer, R.O. 1966. The chemistry of the polymyxin antibiotics. Experientia 22, 345-354. https://doi.org/10.1007/BF01901127
- Wayne, L.G., Brenner, D.J., Colwell, R.R., Grimont, P.A.D., Kandler, O., Krichevsky, M.I., Moore, L.H., Moore, W.E.C., Murray, R.G.E., Stackebrandt, E., et al. 1987. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 37, 463-464. https://doi.org/10.1099/00207713-37-4-463