Korean Journal of Microbiology (미생물학회지)

The Microbiological Society of Korea (한국미생물학회)
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Complete genome sequence of Deinococcus puniceus DY1T, a radiation resistant bacterium

방사선 내성 세균 Deinococcus puniceus DY1T의 완전한 게놈 서열 분석

  • Srinivasan, Sathiyaraj (Department of Bio & Environmental Technology, College of Natural Science, Seoul Women's University) ;
  • Sohn, Eun-Hwa (Department of Herbal Medicine Resources, Kangwon National University) ;
  • Jung, Hee-Young (School of Applied Biosciences, Kyungpook National University) ;
  • Kim, Myung Kyum (Department of Bio & Environmental Technology, College of Natural Science, Seoul Women's University)
  • 스리니바산 사티야라지 (서울여자대학교 자연과학대학 생명환경공학과) ;
  • 손은화 (강원대학교 생약자원개발학과) ;
  • 정희영 (경북대학교 농업생명과학대학 응용생명과학부 응용생물학전공) ;
  • 김명겸 (서울여자대학교 자연과학대학 생명환경공학과)
  • Received : 2018.02.08
  • Accepted : 2018.02.22
  • Published : 2018.03.31
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Abstract

Cells of Deinococcus puniceus $DY1^T$ are Gram-positive, coccus-shaped, and crimson color-pigmented. Strain $DY1^T$ was isolated from soil irradiated with 5 kGy gamma radiation and showed resistance to UVC and gamma radiation. In this study, we report the complete genome sequence of a bacterium Deinococcus puniceus $DY1^T$ is consist of circular chromosome comprised of 2,971,983 bp, with the G + C content of 62.5%. The complete genome sequence was obtained using the PacBio RS II platform, it included 2,617 coding sequences (CDs), 2,762 genes, and 88 pseudogene.

이 연구에서는 5 kGy 의 감마선에 조사된 토양으로부터 분리된 Deinococcus puniceus $DY1^T$의 완전한 게놈서열을 분석하였다. 이 균주는 UVC 와 감마선에 대한 저항성을 보였으며, PacBio RS II platform 을 통해 시퀀싱을 진행하였다. 해당유전체의 분석결과 G + C 함량이 62.5%인 2,971,983 bp 크기의 원형 염색체를 확인하였으며, 해당 염색체는 2,617 개의 코딩 서열과 2,762 개의 유전자 그리고 88 개의 위유전자를 포함하고 있다.

Keywords

References

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