참고문헌
- Boetzer, M. and Pirovano, W. 2014. SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information. BMC Bioinformatics 15, 211. https://doi.org/10.1186/1471-2105-15-211
- Cho, E., Park, S.N., Lim, Y.K., Shin, Y., Paek, J., Hwang, C.H., Chang, Y.H., and Kook, J.K. 2015. Fusobacterium hwasookii sp. nov., isolated from a human periodontitis lesion. Curr. Microbiol. 70, 169-175. https://doi.org/10.1007/s00284-014-0692-7
- Gharbia, S.E. and Shah, H.N. 1990. Heterogeneity within Fusobacterium nucleatum, proposal of four subspecies. Lett. Appl. Microbiol. 10, 105-108. https://doi.org/10.1111/j.1472-765X.1990.tb00276.x
- Gharbia, S.E. and Shah, H.N. 1992. Fusobacterium nucleatum subsp. fusiforme subsp. nov. and Fusobacterium nucleatum subsp. animalis subsp. nov. as additional subspecies within Fusobacterium nucleatum. Int. J. Syst. Bacteriol. 42, 296-298. https://doi.org/10.1099/00207713-42-2-296
- Gnerre, S., Maccallum, I., Przybylski, D., Ribeiro, F.J., Burton, J.N., Walker, B.J., Sharpe, T., Hall, G., Shea, T.P., Sykes, S., et al. 2011. High-quality draft assemblies of mammalian genomes from massively parallel sequence data. Proc. Natl. Acad. Sci. USA 108, 1513-1518. https://doi.org/10.1073/pnas.1017351108
- Kook, J.K., Park, S.N., Lim, Y.K., Cho, E., Jo, E., Roh, H., Shin, Y., Paek, J., Kim, H.S., Kim, H., et al. 2017. Genome-based reclassification of Fusobacterium nucleatum subspecies at the species level. Curr. Microbiol. 74, 1137-1147. https://doi.org/10.1007/s00284-017-1296-9
- Luo, R., Liu, B., Xie, Y., Li, Z., Huang, W., Yuan, J., He, G., Chen, Y., Pan, Q., Liu, Y., et al. 2012. SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. Gigascience. 1, 18. Erratum in: Gigascience. 2015. 4, 30. https://doi.org/10.1186/2047-217X-1-18
- Otto, T.D., Sanders, M., Berriman, M., and Newbold, C. 2010. Iterative correction of reference nucleotides (iCORN) using second generation sequencing technology. Bioinformatics 26, 1704-1707. https://doi.org/10.1093/bioinformatics/btq269
- Park, S.N., Lim, Y.K., and Kook, J.K. 2013. Development of quantitative real-time PCR primers for detecting 42 oral bacterial species. Arch. Microbiol. 195, 473-482. https://doi.org/10.1007/s00203-013-0896-4