DOI QR코드

DOI QR Code

Taxonomical Study of Noteworthy Species of Botryosphaeria in Japan

  • Hattori, Yukako (Graduate School of Bioresources, Mie University) ;
  • Ando, Yuho (Forestry and Forest Products Research Institute) ;
  • Sasaki, Atsuko (Division of Apple Research, Institute of Fruit Tree and Tea Science, National Agriculture and Food Research Organization (NARO)) ;
  • Uechi, Nami (Division of Fruit Production and Postharvest Science, Institute of Fruit Tree and Tea Science, National Agriculture and Food Research Organization (NARO)) ;
  • Nakashima, Chiharu (Graduate School of Bioresources, Mie University)
  • 투고 : 2020.10.01
  • 심사 : 2021.02.18
  • 발행 : 2021.04.30

초록

The reexamination of the fungal genus Botryosphaeria on 12 plant species of 10 families was carried out based on molecular phylogenetic analyses using the regions of translation elongation factor 1-α, β-tubulin, DNA-directed RNA polymerase II subunit, and internal transcribed spacer region of rDNA and morphological characteristics. Japanese isolates were divided into five clades and include Botryosphaeria dothidea, B. qingyuanensis, B. sinensis, and Botryosphaeria spp. Two species, B. qingyuanensis and B. sinensis have been newly added to the Japanese mycoflora, but their host plants are not specified. Botryosphaeria tenuispora isolated from Leucothoe fontanesiana and insect galls on fruits of Aucuba japonica has been proposed as a new species.

키워드

과제정보

This study received financial support from JSPS KAKENHI [grant nos. 20J12025, 20K06146, and 15K07330].

참고문헌

  1. Cesati V, Notaris G. d. Schema di classificazione degli sferiacei italici aschigeri piu' o meno appartenenti al genere Sphaeria nell'antico significato attribuitoglide Persoon. Commentario Soc Crittogamologica Ital. 1863;4:177-240.
  2. Crous PW, Slippers B, Wingfield MJ, et al. Phylogenetic lineages in the Botryosphaeriaceae. Stud Mycol. 2006;55:235-253. https://doi.org/10.3114/sim.55.1.235
  3. Liu JK, Phookamsak R, Doilom M, et al. Towards a natural classification of Botryosphaeriales. Fungal Divers. 2012;57(1):149-210. https://doi.org/10.1007/s13225-012-0207-4
  4. Phillips AJL, Alves A, Abdollahzadeh J, et al. The Botryosphaeriaceae: genera and species known from culture. Stud Mycol. 2013;76(1):51-167. https://doi.org/10.3114/sim0021
  5. Phillips AJL, Hyde KD, Alves A, et al. Families in Botryosphaeriales: a phylogenetic, morphological, and evolutionary perspective. Fungal Divers. 2019;94(1):1-22. https://doi.org/10.1007/s13225-018-0416-6
  6. Slippers B, Wingfield MJ. Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact. Fungal Biol Revol. 2007;21(2-3):90-106. https://doi.org/10.1016/j.fbr.2007.06.002
  7. Marsberg A, Kemler M, Jami F, et al. Botryosphaeria dothidea: a latent pathogen of global importance to woody plant health. Mol Plant Pathol. 2017;18(4):477-488. https://doi.org/10.1111/mpp.12495
  8. Adair RJ, Burgess T, Serdani M, et al. Fungal associations in Asphondylia (Diptera: Cecidomyiidae) galls from Australia and South Africa: Implications for biological control of invasive acacias. Fungal Ecol. 2009;2(3):121-134. https://doi.org/10.1016/j.funeco.2009.02.003
  9. Park I, Sanogo S, Hanson SF, et al. Molecular identification of Botryosphaeria dothidea as a fungal associate of the gall midge Asphondylia prosopidis on mesquite in the United States. BioControl. 2019;64(2):209-219. https://doi.org/10.1007/s10526-019-09924-6
  10. Zimowska B, Okon S, Becchimanzi A, et al. Phylogenetic characterization of Botryosphaeria strains associated with Asphondylia galls on species of Lamiaceae. Diversity. 2020;12(2):41. https://doi.org/10.3390/d12020041
  11. Slippers B, Crous PW, Denman S, et al. Combined multiple gene genealogies and phenotypic characters differentiate several species previously identified as Botryosphaeria dothidea. Mycologia. 2004;96(1):83-101. https://doi.org/10.2307/3761991
  12. Dissanayake AJ, Phillips AJL, Hyde KD, et al. Botryosphaeriaceae: current status of genera and species. Mycosphere. 2016;7(7):1001-1073. https://doi.org/10.5943/mycosphere/si/1b/13
  13. Chen Y, Dissanayake AJ, Liu Z, et al. Additions to Karst Fungi 4: Botryosphaeria spp. associated with woody hosts in Guizhou Province, China including B. guttulata sp. nov. Phytotaxa. 2020;454(3):186-202. https://doi.org/10.11646/phytotaxa.454.3.2
  14. The database of the common names of plant diseases in Japan [internet]. Ibaraki: The Genetic Resources Center, NARO (National Agriculture and Food Research Organization); 2020. [cited 2020 Sep 20]. Available from: https://www.gene.affrc.go.jp/databases-micro_pl_diseases.php.
  15. Hattori Y, Akiba M, Nakashima C. Taxonomic reexamination of Botryosphaeriaceae causing tree disease. Tree Forest Health. 2019;23:42-43.
  16. White TJ, Bruns T, Lee S, et al. Amplified and direct sequencing of fungal ribosomal RNA genes for phylogenies. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ. (eds.), PCR protocols: a guide to methods and applications. Academic Press, San Diego, 1990. p. 315-322.
  17. Carbone I, Kohn LM. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologica. 1999;91(3):553-556. https://doi.org/10.1080/00275514.1999.12061051
  18. Glass NL, Donaldson GC. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl Environ Microbiol. 1995;61(4):1323-1330. https://doi.org/10.1128/aem.61.4.1323-1330.1995
  19. Liu YJ, Whelen S, Hall BD. Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Mol Biol Evol. 1999;16(12):1799-1808. https://doi.org/10.1093/oxfordjournals.molbev.a026092
  20. Ohata K, Araki T, Kiso A, et al. 1995. Sakumotsu byougenkinn kenkyu gihou no kiso -bunri.baiyou.sessyu. Tokyo: Japan Plant Protection Association;1995.
  21. Katoh K, Rozewicki J, Yamada KD. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform. 2019;20(4):1160-1166. https://doi.org/10.1093/bib/bbx108
  22. Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 2006;22(21):2688-2690. https://doi.org/10.1093/bioinformatics/btl446
  23. Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution. 1985;39(4):783-791. https://doi.org/10.2307/2408678
  24. Bouckaert R, Vaughan TG, Barido-Sottani J, et al. BEAST 2.5: an advanced software platform for Bayesian evolutionary analysis. PLoS Comput Biol. 2019;15(4):e1006650. https://doi.org/10.1371/journal.pcbi.1006650
  25. Slippers B, Roux J, Wingfield MJ, et al. Confronting the constraints of morphological taxonomy in the Botryosphaeriales. Persoonia. 2014;33:155-168. https://doi.org/10.3767/003158514X684780
  26. Ariyawansa HA, Hyde KD, Liu JK, et al. Additions to Karst Fungi 1: Botryosphaeria minutispermatia sp. nov., from Guizhou Province, China. Phytotaxa. 2016;275(1):35-44. https://doi.org/10.11646/phytotaxa.275.1.4
  27. Li GQ, Liu FF, Li JQ, et al. Botryosphaeriaceae from Eucalyptus plantations and adjacent plants in China. Persoonia. 2018;40:63-95. https://doi.org/10.3767/persoonia.2018.40.03
  28. Zhou Y, Dou Z, He W, et al. Botryosphaeria sinensia sp. nov., a new species from China. Phytotaxa. 2016;245(1):43-50. https://doi.org/10.11646/phytotaxa.245.1.4
  29. Sawada K. Fungi inhabiting conifers in the Tohoku district. II. Fungi on various conifers except 'Sugi. Bulletin of the Government Forest Experimental Station Meguro. 1950;46:144-148.
  30. Shang YZ. Taxonomic study on the pathogen fungus of shoot blight of larch. Acta Mycol Sinica. 1987;6:248-249.
  31. Sawada K. Descriptive catalogue of Taiwan (Formosan) fungi. Part XI. Special Publication College of Agriculture National Taiwan University. 1959;8:1-268.
  32. Yukawa J, Ohsaki N. Separation of the Aucaba fruit midge, Asphondylia aucubae sp. nov. from the ampelopsis fruit midge, Asphondylia baca MONZEN (Diptera, Cecidomyiidae). Kontyu, Tokyo. 1988;56:365-376.
  33. Harada Y, Usuta Y, Yoshida Y. Warty Stem Blight of Aucuba japonica, a new disease caused by Botryosphaeria sp. (abstracts presented at the Meeting of the Tohoku Division). Jpn J Phytopathol. 1996;62:601.
  34. The U.S. Department of Agriculture fungal host database [internet]. Washington, D.C: United States Department of Agriculture; 2020. [cited 2020 Sep 20]. Available from: https://nt.ars-grin.gov/fungaldatabases/fungushost/fungushost.cfm.

피인용 문헌

  1. Toward a Natural Classification of Botryosphaeriaceae: A Study of the Type Specimens of Botryosphaeria sensu lato vol.12, 2021, https://doi.org/10.3389/fmicb.2021.737541