• Journal of Korea Multimedia Society
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• v.6 no.4
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• pp.576-582
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• 2003

Because of today's rapid growth of digital contents market and many benefits of electronic book, many people have considerable interest in E-book. Furthermore multifarious consortiums take an active part in standardization of I-book, and many E-book tools have been provided by software manufactures all over the world. E-book tools include editor for production of E-Book, viewer for reading, and the like. Especially in E-book viewer, annotation function has to be Included to put arrangement, summation, recording, comment, emphasis and after comprehension to practical use. In this paper, a E-book viewer with annotation is designed according to the specifications of EBKS, Korean standard. The proposed viewer is aimed to implement in PDA with embedded Linux, but developed in Windows 2000 platform. Because development environment and application environment are different each other, Qt-Library and cross-compiler are used for cross-platform development. The viewer support various functions such as adjusting of font size, hypertext linking, retrieval of specific word, and so forth. And in addition to these basic functions, annotation function is designed for the viewer, which can be used for re-usage and sharing of important information.

• Journal of Genetic Medicine
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• v.10 no.1
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• pp.27-32
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• 2013

Post-transcriptional nucleotide sequence modification of transcripts by RNA editing is an important molecular mechanism in the regulation of protein function and is associated with a variety of human disease phenotypes. Identification of RNA editing sites is the basic step for studying RNA editing. Databases and bioinformatics resources are used to annotate and evaluate as well as identify RNA editing sites. No method is free of limitations. Correctly establishing an analytic pipeline and strategic application of both experimental and bioinformatics methods constitute the first step in investigating RNA editing. This review summarizes modern bioinformatics approaches and related resources for RNA editing research.

• Genomics & Informatics
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• v.18 no.2
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• pp.15.1-15.6
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• 2020

Named entity recognition tools are used to identify mentions of biomedical entities in free text and are essential components of high-quality information retrieval and extraction systems. Without good entity recognition, methods will mislabel searched text and will miss important information or identify spurious text that will frustrate users. Most tools do not capture non-contiguous entities which are separate spans of text that together refer to an entity, e.g., the entity "type 1 diabetes" in the phrase "type 1 and type 2 diabetes." This type is commonly found in biomedical texts, especially in lists, where multiple biomedical entities are named in shortened form to avoid repeating words. Most text annotation systems, that enable users to view and edit entity annotations, do not support non-contiguous entities. Therefore, experts cannot even visualize non-contiguous entities, let alone annotate them to build valuable datasets for machine learning methods. To combat this problem and as part of the BLAH6 hackathon, we extended the TextAE platform to allow visualization and annotation of non-contiguous entities. This enables users to add new subspans to existing entities by selecting additional text. We integrate this new functionality with TextAE's existing editing functionality to allow easy changes to entity annotation and editing of relation annotations involving non-contiguous entities, with importing and exporting to the PubAnnotation format. Finally, we roughly quantify the problem across the entire accessible biomedical literature to highlight that there are a substantial number of non-contiguous entities that appear in lists that would be missed by most text mining systems.

• Journal of The Korean Association of Information Education
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• v.11 no.1
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• pp.107-116
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• 2007

To produce accurate editing results, the ambiguity of editing scopes related to marked correction signs should be solved. Proofreading the web document modifies the document structures, and the modified structures should be robustly valid for the defined DTD. This paper presents a pen-based proof-reading interface in the XML document. In the proposed interface, correction signs are free-drawn, and the editing scopes are recognized and revised based on the contexts of the document to minimize the ambiguity of the editing scopes. The proposed interface provides both implicit and explicit modification methods for document structures. As a result, the editing scopes processed in the proposed interface are more accurate, and the document structures are maintained valid for DTD after the editing.

• Proceedings of the Korea Multimedia Society Conference
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• 2002.11b
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• pp.780-785
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• 2002

오늘날 디지털 컨텐츠 시장의 급성장, 그리고 전자책이 갖는 장점들로 인하여 전세계적으로 전자책에 많은 관심을 집중시키고 있으며, 이에 전세계적으로 각국에서는 전자책 문서의 표준화를 위한 컨소시엄이 활동 중에 있다. 또한 전자책을 보기 위한 도구인 E-Book Viewer에 대한 여러 연구 및 서비스가 제공되고 있다. 이 중에서 주석 기능은 정보 공유 및 검색과 같은 다양한 활용을 위하여 반드시 필요한 기능이라 하겠다. 이에 본 연구에서는 주석을 지원하는 PDA용 E-Book Viewer의 설계를 위하여 Windows 환경에서 QT Labrary를 이용하였으며, 폰트의 크기와 스킨의 색상, 주석의 표현 여부 등을 설정할 수 있고, 특정 단어를 검색하는 기능을 지원한다.

• The KIPS Transactions:PartB
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• v.13B no.1 s.104
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• pp.63-70
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• 2006

In general, a corpus contains lots of linguistic information and is widely used in the field of natural language processing and computational linguistics. The creation of such the corpus, however, is an expensive, labor-intensive and time-consuming work. To alleviate this problem, annotation tools to build corpora with much linguistic information is indispensable. In this paper, we design and implement an annotation tool for establishing a Korean dependency tree-tagged corpus. The most ideal way is to fully automatically create the corpus without annotators' interventions, but as a matter of fact, it is impossible. The proposed tool is semi-automatic like most other annotation tools and is designed to edit errors, which are generated by basic analyzers like part-of-speech tagger and (partial) parser. We also design it to avoid repetitive works while editing the errors and to use it easily and friendly. Using the proposed annotation tool, 10,000 Korean sentences containing over 20 words are annotated with dependency structures. For 2 months, eight annotators have worked every 4 hours a day. We are confident that we can have accurate and consistent annotations as well as reduced labor and time.

• Journal of Korean Medical classics
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• v.28 no.1
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• pp.71-95
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• 2015

Objectives : I'd like to introduce a Korean medical scientist, Lee Gyoojoon (李圭晙, 1855-1923)'s achievements about Huangdi's Internal Classic (黃帝內經, HIC) to examine the Section of Viscera and Bowels to inspect the Medical Classics (稽經藏府篇, SVBIM) of the Double grinded Medical Mirror (醫鑑重磨, DMM), which is a medical book published in 1922, his last studies. And I'd like to describe its meaning of medical history. Methods : For this, I compared the DMM with two primary texts, the representative medical books of Joseon dynasty, Treasured Mirror of Eastern Medicine (東醫寶鑑, TMEM) and Lee's former research result of HIC, Major Essentials of Huangdi's Internal Classic Plain Question (黃帝內經素問大要, MEHIC), in the aspects of the original text, annotation, editing, attached theses, and so on. Results : Lee Gyoojoon criticized the TMEM in two aspects. First, it was unfocused and miscellaneous, second, it intended to help Yin Qi (陰氣) and reduce Yang Qi (陽氣) so that it regards a prime mover, Yang Qi, as an enemy. In order to solve these problems he deleted miscellaneous articles and sort out the points to accord with the HIC. As a result, he had written the Section of SVBIM of the DMM in the form of revising the subtitles or refuting the contents of TMEM and quoted the partial texts of MEHIC to be written by the view of Supporting Yang Qi (扶陽). Conclusions : Lee Gyoojoon proposed the Supporting Yang Qi medicine to preserve the Heart fire (心火) based on his lifelong Neo-Confucianism (性理學) study. The Section of SVBIM of the DMM showed how to apply his medical theory, which is achieved by the study of the medical classic HIC to real clinical medicine through a medium of the TMEM. In addition, it could explain concretely how the Confucianists studied the medicine and how Confucianism can impact to the development of medical theory.

• Journal of KIISE:Software and Applications
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• v.33 no.2
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• pp.231-242
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• 2006

Accurate proofreading Interface requires resolving the ambiguity that occurs when the system determines the relations between the free-form by the user and editing scopes of the document. Proofreading for structure documents such as XML/XHTML involves modification of document structures and modified document also should follow the pre-defined DTD. This paper present a CPI (Context-based Proofreading Interface) based on the XML. The CPI supports free-form drawing of correction marks and provides context-based scope recognition and revision methods. CPI provides both implicit and explicit modification methods for document structures. As a result, the correction mark information produced in this paper includes more accurate scope information than that in other systems.

• Journal of the Korea Institute of Information and Communication Engineering
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• v.14 no.12
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• pp.2601-2608
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• 2010

It is difficult to merge text document and to remake use of documents on the most collaborative document authoring system using text document, and also to provide the storage place for saving and keeping documents. It has vulnerable drawbacks about the security though it provides the accessible abilities due to basing it on Web. In this paper, we design and implementation the collaborative document authoring system for XML document to improve a couple of problems on these systems. For these, we based on the DOM to manipulate the modeling object documents and utilized RMI on this system without considering socket communication when it transmits and receives Java objects. We improved the security through processes of authentication. By providing templates and editing functions such as annotation, visualization of document structures, we made easier making collaborative document authoring more than ever.