• The Korean Journal of Mycology
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• v.46 no.4
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• pp.467-477
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• 2018

Colletotrichum circinans, an anthracnose pathogen, causes serious damage to onions worldwide. In this study, specific molecular markers were developed to detect C. circinans accurately and quickly with both conventional and real-time PCR methods. The cirTef-F/cirTef-R and cirTu-F/cirTu-R primer sets, which are specific for C. circinans, were constructed by analyzing $tef-1{\alpha}$ and ${\beta}-tubulin$ genes in the fungus. Using the conventional PCR method, 100 pg and 1 ng of fungal DNA could be detected using the cirTef-F/cirTef-R and cirTu-F/cirTu-R sets, respectively. Using the real-time PCR method, 10 pg and 100 pg of fungal DNA could be detected more sensitively with the cirTef-F/cirTef-R and cirTu-F/cirTu-R sets, respectively. Detection of C. circinans from the artificially infected onion seeds was possible by using both conventional and real-time PCR methods and the developed cirTef-F/cirTef-R primer set. The PCR markers specific for C. circinans developed in this study may enhance the efficiency of fungal pathogen detection in imported vegetables and seeds.

• Mycobiology
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• v.36 no.4
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• pp.274-276
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• 2008

Anthracnose occurred frequently on leaf sheaths of Welsh onions grown in Gangwha island, Korea in November, 2007. The disease incidence was as high as 30% in five fields investigated. A total of 20 single spore isolates of Colletotrichum species were obtained from the affected plants, and all the isolates were identified as Colletotrichum circinans based on their morphological and cultural characteristics. Three isolates of the fungus caused anthracnose symptoms on the leaf sheaths of Welsh onions by artificial inoculation, which were similar to those observed during the field survey. In this study, the mycological and pathological characteristics of C. circinans identified as causing anthracnose of Welsh onions are clarified.