• Title/Summary/Keyword: Rice black-streaked dwarf virus

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Occurrence and Detection of Rice black-streaked dwarf virus in Korea

  • Lee, Bong-Choon;Hong, Yeon-Kyu;Hong, Sung-Jun;Park, Sung-Tae;Lee, Key-Woon
    • The Plant Pathology Journal
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    • v.21 no.2
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    • pp.172-173
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    • 2005
  • Until now, occurrence of Rice black-streaked dwarf virus (RBSDV) is observed in Gyeongsang provinces, southeastern part of Korea. However, recently, the occurrence of RBSDV is increasing and spreading in Jeonra provinces including Gochang-gun, southwestern part of Korea. RBSDV infected plants showed typical symptoms including stunted, deformed leaves with white waxy or black-streaked swelling along the veins. We extracted viral genomic dsRNA from infected leaves and analyzed dsRNA pattern by polyacrylamide gel electrophoresis. Ten genomic segments with similar sized dsRNAs were observed. We also detected RBSDV by reverse transcription (RT)-PCR using specific primers for S10 from genomic dsRNA and observed amplified DNA fragment specific for RBSDV S10.

The Complete Genome Sequence of Southern rice black-streaked dwarf virus Isolated from Vietnam

  • Dinh, Thi-Sau;Zhou, Cuiji;Cao, Xiuling;Han, Chenggui;Yu, Jialin;Li, Dawei;Zhang, Yongliang
    • The Plant Pathology Journal
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    • v.28 no.4
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    • pp.428-432
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    • 2012
  • We determined the complete genome sequence of a Vietnamese isolate of Southern rice black-streaked dwarf virus (SRBSDV). Whole genome comparisons and phylogenetic analysis showed that the genome of the Vietnamese isolate shared high nucleotide sequence identities of over 97.5% with those of the reported Chinese isolates, confirming a common origin of them. Moreover, the greatest divergence between different SRBSDV isolates was found in the segments S1, S3, S4 and S6, which differs from the sequence alignment results between SRBSDV and Rice black streaked dwarf virus (RBSDV), implying that SRBSDV evolved in a unique way independent of RBSDV. This is the first report of a complete nucleotide sequence of SRBSDV from Vietnam and our data provides new clues for further understanding of molecular variation and epidemiology of SRBSDV in Southeast Asia.

Molecular Diagnosis of Rice Black-Streaked Dwarf Virus in Japan and Korea

  • Masamichi Isogai;Ichiro Uyeda;Park, Jang-Kyung
    • The Plant Pathology Journal
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    • v.17 no.3
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    • pp.164-168
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    • 2001
  • Rice black-streaked dwarf virus (RBSDV) and Maize rough dwarf virus (MRDV) are closely related viruses. Since the two viruses produce identical symptoms on maize, barley, and wheat, diagnosis of infected plants is difficult. Previously, we reported that partial cDNA clones of RBSDV S5 and S6 from the Japanese isolate (RBSDV-H) have lower sequence homology to MRDV than do cDNA clones from other genomic segments. In order to test whether cDNA clones of RBSDV-H S5 and S6 can be used for molecular diagnosis, RBSDV field isolates from Korea and from Hokkaido, Japan were tested in dot blot hybridizations probed with RBSDV-H S5 and S6 cDNA colnes. Hybridization with these probes was more intense against the RBSDV genome than against the MRDV genome. Therefore, RBSDV-H S5 and S6 cDNA clones can be used to differentiate between the two viruses. Furthermore, RBSDV-H S5 and S6 clones reacted more strongly against the viruses from stunted maize plants from Korean fields than to MRDV, indicating that RBSDV may be the causal disease agent in maize plants in Korea.

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Studies on the Occurrence of Rice Black-Streaked Dwarf Virus in Korea (한국에서 벼 흑조위축병의 발생에 대하여)

  • Lee Jai Youl;Lee Soon Hyung;Chung Bong Jo
    • Korean journal of applied entomology
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    • v.16 no.2 s.31
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    • pp.121-125
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    • 1977
  • This is the first report on. rice black-streaked dwarf virus in Korea. The occurrence of this virus in Korea was confirmed by symptoms On rice Plants, Vector transmission and microscopic Observation in 1975. The smaller brown planthopper, Laodelphax striatellus FALLEN, transmits this virus which is spherical with a diameter of about 60 nm. Higher infection was observed in earlier transplanted rice with higher levels of fertilizer than in normal and standard cultivation fields.

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The Effects of Rice Black-Streaked Dwarf Virus on Vector (Laodelphax striatellus U.) and Host Plants (벼검은줄오갈병 바이러스가 매개충 및 기주식물에 미치는 영향)

  • Lee Key Woon;Kim Sang Kyu
    • Korean Journal Plant Pathology
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    • v.1 no.3
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    • pp.190-194
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    • 1985
  • The insect vector (Laodelphax striatellus) of rice black-streaked dwarf virus prefered rice plant to maize in feeding both in the cage and in the field, whereas the percent of infectious plants was much higher in maize than rice plants. The causal virus reduced the adult longevity, total number of hatching nymphs and maturity rate from nymphs of the insect vector. The percent of dry weight over fresh weight in rice from early to late growth stages was lower in diseased plants than in healthy plants but it was reversed on maize plant in early growth stage. In agarose gel-diffusion and microprecipitin serological tests, the intensities of antigen with antisera were in orders the preparation partially purified from infected maize leaves> rice stems> rice leaves> maize stems. The pholem galls in diseased plants developed well in the low temperature.

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A Molecular Study of Rice Black-Streaked Dwarf Virus (벼 흑조위축병 바이러스의 분자생물학적 연구)

  • Park, Jong-Sug;Bae, Shin-Chyul;Kim, Young-Min;Paik, Young-Ki;Kim, Ju-Kon;Hwang, Young-Soo
    • Applied Biological Chemistry
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    • v.37 no.3
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    • pp.148-153
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    • 1994
  • Rice black-streaked dwarf virus (RBSDV), a member of the plant reoviridae fijivirus group, causes a serious damage for rice production in Korea. To characterize the RBSDV genome, virus particles were produced by feeding of planthopper (Laodelphax striatellus F.) carring RBSDV to maize plants for 2 days. In $30{\sim}40$ days after feeding, the viral particles were purified from the infected maize roots by using $10{\sim}40%$ sucrose gradient centrifugation. After treatment of 10% SDS to remove the viral coat proteins, ten viral double-stranded RNAs were resolved in agrose gel electrophoresis. Total dsRNA was then used to synthesize cDNA by reverse transcriptase and a cDNA library was constructed in the ${\lambda}gt11$ vector. The phages that contain RBSDV cDNA fragments were selected by hybridizing with the random-primed probe prepared from RBSDV dsRNAs. After subcloning of several cDNA fragments into the pUC19 plasmid vector, one clone (pRV3) was chosen for sequencing. The pRV3 clone was shown to be located on the RBSDV genome fragment No.3 by RNA gel-blot analysis. Sequence analysis of the clone revealed that the pRV3 contains two partial open reading frames.

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Characterization of Rice black-streaked dwarf virus in Maize (옥수수에 발생하는 벼검은줄오갈병의 유전자 비교)

  • Lee, Bong-Choon;Yoon, Young-Nam;Hong, Sung-Jun;Hong, Yeon-Kyu;Hwang, Jae-Bok;Song, Sek-Bo;Kang, Hwang-Won;Lee, Key-Woon
    • Research in Plant Disease
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    • v.14 no.3
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    • pp.223-225
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    • 2008
  • This study was carried out to identify the Rice black-streaked dwarf virus that infected maize plants collected from Gochang-gun in Jeollabukdo in 2005. The genomic dsRNA from infected plants was extracted and the genome pattern was analyzed by polyacrylamide gel electrophoresis. Results of the electrophoresis revealed the already known to-segment genome and the difference of mobility was confirmed in isolates by collected areas. The RBSDV was identified from the result of RT-PCR using the template of extracted dsRNA and specific primer. The results of S10 cloned to pGEM-T vector and the conducted in sequence analysis consisted of 1,801nt and 559aa. This was of the same size as the RBSDV S10 identified in rice, and the change was confirmed in 18 base and displayed homology of 99%.

Construction of a Hammerhead Ribozyme that Cleaves Rice Black-Streaked Dwarf Virus RNA (흑조위축병 바이러스 RNA를 절단하는 망치머리형 라이보자임의 제작)

  • Kim, Ju-Kon;Sohn, Seong-Han;Lee, Sug-Soon;Hwang, Young-Soo;Park, Jong-Sug
    • Applied Biological Chemistry
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    • v.38 no.6
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    • pp.522-527
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    • 1995
  • To develop an antiviral agent for the rice black-streaked dwarf virus (RBSDV), a hammerhead type ribozyme, which has a potential target site on the genome segment 3, was designed. Oligonucleotides for the ribozyme and its substrate were synthesized, annealed, and cloned into a plasmid pBluescript II KS(+). Ribozyme and substrate RNAs were then synthesized by in vitro transcription with $T_3$ RNA polymerase, obtaining RNAs in expected size, 193 and 182 nucleotides, respectively. The substrate RNA was efficiently cleaved into two fragments when incubated with the ribozyme at $55^{\circ}C$, while the cleavage was not detected at $37^{\circ}C$. In addition, the segment 3 RNA of RBSDV was also cleaved into two fragments by the same ribozyme at $55^{\circ}C$. Taken together, our results demonstrated that the hammerhead ribozyme has an in vitro endonucleolytic activity and may be used as an antiviral agent in transgenic plants.

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Productivity of Silage Corn Hybrides in Rice Black-Streaked Dwarf Virus Prevalent Region (흑조위축병 다발지역에서 사일리지 옥수수 품종의 생산성)

  • 이석순;이진모
    • Journal of The Korean Society of Grassland and Forage Science
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    • v.7 no.3
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    • pp.140-145
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    • 1987
  • In 1985 and 1986, silage productivity of 8 Korean improved and 7 US introduced corn hybrids and their resistance to rice black-streaked dwarf virus (RBSDV) were tested in the southern part of Korea where RBSDV is prevalent. The results obtained are summarized as followes: 1. Percentage of RBSDV diseased plantes differed depending on the year and hybrid. Suweon 19, Kwangok, Hoengseungok, Jecheonok, Pioneer 3424, Pioneer 3H001, NC6 13 1 were most susceptible, Pioneer 3 160 and Pioneer 3358 were moderately susceptible, and Nampyungok, Suweon 90, Pioneer XCF38, PB 2, and Jinjuok were least suceptible. No hybrid was completely resistant to RBSDV. 2. There were negative correlations between percentage of RBSDV diseased plants and culm length, percentage of ear bearing plants, ear yield, silage yield, or digestible dry matter, but percentage of RBSDV diseased plants was not correlated with stover yield. 3. Silage yield of Jinjuok, Pioneer 3160, Pioneer 3358, and Pioneer XCF38 were higher than that of other hybrids in both years. However, digestible dry matter of Nampyungok, Suweon 89, and Suweon 90 were higher than that of other hybrids due to a higher proportion of ear in 1986 when RBSDV infection was severer.

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