• Title/Summary/Keyword: Species affinity

Search Result 161, Processing Time 0.028 seconds

The studies on affinity between Miscanthus sinensis and other plants (Miscanthus sinensis와 타 식물과의 친근성에 관한 연구)

  • 이일구
    • Journal of Plant Biology
    • /
    • v.13 no.4
    • /
    • pp.1-11
    • /
    • 1970
  • Althought allelopathy has been cleary established for Pinus densiflora by Lee-Monsi, the auther suspected that Miscanthus sinensis which grows vigrously in such Korean pine forests might also exhibit the phenomenon. A total of 33 species having an affinity in the Miscanthus group were recorded in the filed. Out of these, five species; Patrinia scabiosaefolia, Lespedeza crytobotrya. Oenothera odorata, Raphanus sativus var. acanthiformis, and Zoysia japonica were considered the "A" group. Five other species which have no affinity to Misanthus sinensis, Amaranthus patulus, Solanum nigrum, Capsella bursa-pastoris var. triangularis, Chemopodium album var. centrorubrum and Alopeculus amurensis were considered the "B" group. Extracts of Miscanthus sinensis were applied to determine relative germination and growth. It was found the growth in the "B" group was promoted by a cold water extract of Miscanthus stems and leaves, but inhibited remarkably by an extract obtained by passing cold water through Miscanthus root. As expected, growth in the "A" group was promoted by both experimental treatments.romoted by both experimental treatments.

  • PDF

Molecular Systematics of Korean Cobitids Based on Mitochondrial Cytochrome b Sequence

  • Kim, So-Young;Kim, Chang-Bae;Kim, Ik-Soo;Park, Jong-Young;Park, Ho-Yong
    • Animal cells and systems
    • /
    • v.6 no.1
    • /
    • pp.45-51
    • /
    • 2002
  • We compared the complete mitochondrial cytochrome b gene sequences of Korean and European cobitids to provide independent evidence for assessment of systematic and biogeographic relationships of species in the genus Cobitis. The data suggested monophyly of the genus Cobitis and the inclusion of Korean Cobitis species within the group having one lamina circularis, a primitive condition. Also, all the phylogenetic analyses using maximum parsimony, maximum likelihood, and neighbor joining methods showed a monophyletic relationship among Cobitis. The basal position of the Caspian C. cf. sibirica reported here reflects the eastern Asiatic origin cf. the European Cobitis and establishes C. cf. sibirica as an independent lineage. The Korean C. pacifica diverged next to C. cf. sibirica in basal group from the genus Cobitis. This result is in agreement with the hypothesized Asiatic origin of some European freshwater fish lineages. The phylogenetic relationships in this study showed a close affinity between C. zanadreai and C. sinensis. Two new species, C. tetralineata and C. pacifica in Korea also are closely related to monophyletic group clustering the type species of the Acanestrinia subgenus (C. elongata) with all the endemic Italian species (C. bilineata and C. zanandreai). This may suggest that the affinity between the Korean and Danubian-Italian imply genetic convergence or genetic plesiomorphic state between allopatric species that are separated for the Miocene. The mtDNA-based phylogeny for the species of the genus Cobitis from Kores and Europe permits phylogenetic assessment of the morphological transitions of Iamina circularis.

Binding of Cytokinin to Proteins of Soybean (Glycine max) Leaves (Cytokinin과 대두(Glycine max) 잎단백질의 결합에 대하여)

  • Choung, Chang-Cho;Yoo, Ki-Jung;Park, Chang-Kyu
    • Applied Biological Chemistry
    • /
    • v.29 no.1
    • /
    • pp.10-15
    • /
    • 1986
  • A polyacrylamide gel electrophoresis technique was applied to cytokinin-protein binding assay. Binding of soybean leaf proteins to cytokinin and relative affinities of protein fractions to cytokinin were studied. The electrophoresis technique appeared to be very useful for determination of cytokinin-protein binding, for identification of protein species binding to cytokinin and for comparison of relative affinities of the proteins to cytokinin. The presence of cytokinin-binding proteins in soybean leaves was confirmed from assays with ammonium sulfate precipitation, Sephadex G-25 chromatography, paper chromatography, and electrophoresis. Three groups of cytokinin-binding proteins were identified in the soybean leaf protein extract and two of the three showed low affinity to cytokinin, however, the third one with mobility between $0.0{\sim}0.2$, probably high molecular weight protein (s), showed high affinity in the electrophoretic analysis.

  • PDF

Studies on the Intertidal Macrofauna Community at Yong-ho Bay, Busan, Korea (용호만 조간대의 동물군집에 관한 연구)

  • YI Soon Kil
    • Korean Journal of Fisheries and Aquatic Sciences
    • /
    • v.8 no.3
    • /
    • pp.133-149
    • /
    • 1975
  • 1. A quantitative ecological investigation of the intertidal sand beach at Yong-ho Bay, located about 6km NE of Busan Harbour was carried out from February, 1974 to February, 1975. Composition of the fauna, diversity, faunal affinity and distributions in time and space were studied. Some ecological factors influencing to the community also discussed. 2. The beach can be classified as a fine-sand beach which is dominated by Armandia lanceolata and Nephtys sp. (A). Thirty two species of animals representing 29 genera were found. In number, two polychaetes, A. lanceolata and Nephtys sp. (A) were dominant, while one polychaete, Neanthes japonica and one bivalvia, Laternula limicela were dominant in weight. 3. Distribution of the fauna was devided into three areas of different faunal compositions with sediment types particularly by mud fraction content, and it well agreed with faunal affinity and diversity index value. 4. Seasonal fluctuation of the three dominant species, A. lanceolata, Nephtys sp. (A) and N. japonica was studied. Except Nephtys sp. (A), the fluctuation were closely related to the brooding time. 5. There was no relationship between faunal distribution and organic matter content. Submergence time affected the distribution of some species but the influence to the whole-community was little.

  • PDF

Sequence to Structure Approach of Estrogen Receptor Alpha and Ligand Interactions

  • Chamkasem, Aekkapot;Toniti, Waraphan
    • Asian Pacific Journal of Cancer Prevention
    • /
    • v.16 no.6
    • /
    • pp.2161-2166
    • /
    • 2015
  • Estrogen receptors (ERs) are steroid receptors located in the cytoplasm and on the nuclear membrane. The sequence similarities of human $ER{\alpha}$, mouse $ER{\alpha}$, rat $ER{\alpha}$, dog $ER{\alpha}$, and cat $ER{\alpha}$ are above 90%, but structures of $ER{\alpha}$ may different among species. Estrogen can be agonist and antagonist depending on its target organs. This hormone play roles in several diseases including breast cancer. There are variety of the relative binding affinity (RBA) of ER and estrogen species in comparison to $17{\beta}-estradiol$ (E2), which is a natural ligand of both $ER{\alpha}$ and $ER{\beta}$. The RBA of the estrogen species are as following: diethyl stilbestrol (DES) > hexestrol > dienestrol > $17{\beta}-estradiol$ (E2) > 17- estradiol > moxestrol > estriol (E3) >4-OH estradiol > estrone-3-sulfate. Estrogen mimetic drugs, selective estrogen receptor modulators (SERMs), have been used as hormonal therapy for ER positive breast cancer and postmenopausal osteoporosis. In the postgenomic era, in silico models have become effective tools for modern drug discovery. These provide three dimensional structures of many transmembrane receptors and enzymes, which are important targets of de novo drug development. The estimated inhibition constants (Ki) from computational model have been used as a screening procedure before in vitro and in vivo studies.

Phylogenetic Relationship of Ganoderma Species with the Polyporaceae Based on RFLP Analysis of the Nuclear ITS Region

  • Park, Hong Je;Shin, Kee Sun;Lee, Dong Hun;Bae, Kyung Sook
    • Journal of Microbiology
    • /
    • v.34 no.2
    • /
    • pp.117-123
    • /
    • 1996
  • Restriction-polymorphic patterns of nuclear-ITS were examined for the genetic relationships among 12 bisidiomycetous mushrooms to Aphyllophorales and Agaricales. The taxonomic affinity of Ganoderma species with the family Polyporaceae also was examined. With 13 restriction endonucleases, 159 restriction characters were generated form the 12 species examined. UPGMA and neighbor-joining analyses separated the 12 species into two genetically distinct groups that correspond to orders (Agaricales and Aphyllophorales) where each species is included. This result indicates that there is clear genetic demarcation between Agaricales and Aphyllophorales. Dendrograms constructed by several data analyses showed that even though Ganoderma species are somewhat in intermediate taxonomic position between the Polyporaceae and families of the Agaricales, they are genetically more related to the Polyporaceae. These results are consistent with morphological characters observed in those mushrooms. However, it is premature to conclude taxonomic status Ganoderma species in the present study employing small sample size.

  • PDF

The Search of Pig Pheromonal Odorants for Biostimulation Control System Technologies: A 2D-QSAR Model for Binding Affinity between 2-Cyclohexyloxytetrahydrofurane Analogues and Porcine Odorant Binding Protein (생물학적 자극 통제 수단으로 활용하기 위한 돼지 페로몬성 냄새 물질의 탐색: 2-Cyclohexyloxytetrahydrofurane 유도체와 Porcine Odorant Binding Protein 사이의 결합 친화력에 관한 2D-QSAR 모델)

  • Park, Chang-Sik;Choi, Yang-Seok;Sung, Nack-Do
    • Reproductive and Developmental Biology
    • /
    • v.31 no.1
    • /
    • pp.15-20
    • /
    • 2007
  • To search of a new porcine pheromonal odorant for biostimulation control system technologies to offer a potentially useful and practical way to improve reproductive efficiency in livestock species, the two dimensional quantitative structure-activity relationship (QSAR) models between physicochemical parameters as descriptors of 2-cyclohexyloxytetrahydrofurane (A), 2-phenoxytetrahydrofurane (B) analogues and binding affinity constant ($p[Od.]_{50}$) for porcine odorant-binding protein (pOBP) as receptor of pig pheromones were derived and disscused. The statistical quality of the optimized 2D-QSAR model is good ($r^{2}=0.964$) and accounts for 96.4% of the variance in the binding affinity constants. It was found that the binding affinity constants were dependent upon the optimal value, $(SL)_{opt.}=1.418$ of substituent lipole (SL) in molecules. Therefore, the SL constant was very important factor for binding affinity.

Host Specificities Between Soybean Varieties and Rhizobium japonicum Strains (대두품종(大豆品種)과 선발(選拔) Rhizobium japonicum간의 숙주(宿主) 친화성(親和性))

  • Kim, Chang-Jin;Rhee, Yoon;Kim, Sung-Hoon;Yoo, Ick-Dong;Mheen, Tae-Ick
    • Korean Journal of Soil Science and Fertilizer
    • /
    • v.19 no.4
    • /
    • pp.345-350
    • /
    • 1986
  • In order to select suitable strains for utilization as soybean inoculants, the affinity between Rhizobium japonicum strains isolated from the domestic field and the several soybean varieties being distributed as recommended species was investigated by cross-inoculation experiments. The results obtained are as follows: 1. Rhizobium japonicum R-214 and R-138 showed broad affinity range to varies soybean species in terms of the nodule forming ability, the nitrogen fixing activity and the amount of total nitrogen absorption. In contrast, Rhizobium japonicum R-224 showed very low affinity to the same soybean groups. 2. The affinity of Hwang-Keum Kong and Jang-Paeck Kong to the rhizobium strains was the most signigicant, and that of Jang-Yeop Kong, Dong-Buk Tae, Paeck-Woon Kong and Dan-Yeop Kong was also significant. On the other hand, Pang-Sa Kong showed low affinity to the strains. 3. In general, the strains having high nitrogen-fixing activity seemed to possess the broad affinity range to the soybean hosts.

  • PDF

Cryptic species diversity of the red algal genus Callophyllis (Kallymeniaceae, Gigartinales) from Korea

  • Lee, Hyung Woo;Kim, Myung Sook
    • Journal of Ecology and Environment
    • /
    • v.37 no.4
    • /
    • pp.395-410
    • /
    • 2014
  • The genus Callophyllis is recorded as six separate species with imprecise species delimitation in Korea. To elucidate the species boundaries of Korean Callophyllis, we performed morphological observations and molecular analyses, and included three Japanese Callophyllis species from the type locality. From the results of molecular analyses using plastid rbcL and mitochondrial COI-5P genes, we confirmed ten Callophyllis species, including five cryptic ones: C. adhaerens, C. adnata, C. crispata, and C. japonica from Korea and Japan; C. hayamensis as an unrecorded species from Korea; C. cartilaginea, C. mollitia, C. repens, C. serratifolia, and C. undulata as new species from Korea. There were no Korean specimens that matched C. adnata or C. crispata from Japan, except Korean C. japonica, which formed a genetic group with the Japanese species. We obtained the interspecific divergences among the five cryptic species as 0.6-4.5% in rbcL and 2.8-8.4% in COI-5P. We recognized that the species diversity of Callophyllis has been underestimated from the northwestern Pacific region. The species boundary of Callophyllis from Korea and Japan will be a cornerstone to revealing the phylogenetic affinity of the genus distributed in both hemispheres of the western Pacific.

The Relationship between Affinity of Membrane and Optimum Operation Conditions in the Pervaporation of Aqueous Ethanol (에탄올 수용액의 투과증발에 있어서 막의 친화성과 최적 조업조건의 관계)

  • 전종기;명완재;임선기
    • Membrane Journal
    • /
    • v.1 no.1
    • /
    • pp.34-43
    • /
    • 1991
  • The relationships between affinity of membranes and optimum operation conditions were investigated in the pervaporation of water(1)/ethanol(2) mixture through cellulose acetate(CA) membranes having more affinity to water and silicone rubber(SR) membranes having more affinity to ethanol. CA and SR membranes were prepared and amount of sorption, sorption selectivity, pervaporation separation factor and pervaporation rate in both of membranes were determined and compared. The effects of downstream pressure were analyzed using Thompson diagram and the sorption and pervaporation characteristics with composition of feed and operation temperature were examined in terms of affinity, activity coefficient, plasticizing effect and activation energy of individual species. In the separation of water through CA membranes, high performance of both pervaporation separation factor (water to ethanol, $[\alpha^2_1]_{PV}$) and pervaporation rate was obtained in the conditions of low downstream pressure, middle range of feed concentration and high temperature. In the separation of ethanol through SR membranes, pervaporation separation factor(ethanol to water, $[\alpha^2_1]_{PV}$) increased with downstream pressure and decreased with concentration of ethanol in feed and operation temperature, while pervaporation rate showed opposite trends to those of ($[\alpha^2_1]_{PV}$).

  • PDF