• Title/Summary/Keyword: Truncation Selection

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FACTORS AFFECTING AGE STRUCTURES AND GENETIC RESPONSES TO TRUNCATION SELECTION SCHEMES IN A POPULATION WITH OVERLAPPING GENERATIONS

  • Ghaffar, A.;Shimizu, H.
    • Asian-Australasian Journal of Animal Sciences
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    • v.6 no.4
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    • pp.497-507
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    • 1993
  • Four truncation selection schemes (SSs) were framed to predict and compare the age structures and genetic responses under the influence of various factor employing the scheme-specific algorithms. Two paths of selection, sires (bulls' sires) and dams (bulls' dams) to breed young bulls were considered. Among variable factors, four levels (0.3, 0.5, 0.7, 0.9) of precision of evaluation, five levels (0.0, 0.05, 0.10, 0.15, 0.20 genetic standard deviation) of genetic differences among age classes and 4 levels of proportions selected (for bulls' sire, 0.05, 0.10, 0.125, 0.25, and for bulls' dams 0.02, 0.04, 0.05, and 0.10) contemplated on both paths of selection. The number of age classes for bulls' dams and bulls' sires were 4 or 8 and 2 or 4, respectively. The stayability across age classes for bulls' dams was assumed to be 0.80 or 0.60. The candidates for selection for bulls' sires were equally distributed (0.5 or 0.25) across the age classes. The SS1 (selection on same proportions as candidates' distribution) revealed longest generation lengths and lowest yearly genetic responses. The average ages were youngest and yearly genetic responses were highest in SS4 (selection at each age-specific truncation point with the same average genetic superiority of selected parents across the ages) and followed by SS3 (selection at each agespecific truncation point with same predicted genetic values) and SS2 (selection at common truncation point on phenotypic values) in a population with overlapping generations. The results revealed the importance of choosing suitable selection scheme to acquire maximum yearly genetic responses especially when the genetic differences among age classes are large and the precision of evaluation is relatively low.

Truncation Parameter Selection in Binary Choice Models (이항 선택 모형에서의 절단 모수 선택)

  • Kim, Kwang-Rae;Cho, Kyu-Dong;Koo, Ja-Yong
    • Communications for Statistical Applications and Methods
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    • v.17 no.6
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    • pp.811-827
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    • 2010
  • This paper deals with a density estimation method in binary choice models that can be regarded as a statistical inverse problem. We use an orthogonal basis to estimate density function and consider the choice of an appropriate truncation parameter to reflect the model complexity and the prediction accuracy. We propose a data-dependent rule to choose the truncation parameter in the context of binary choice models. A numerical simulation is provided to illustrate the performance of the proposed method.

Selection-based Low-cost Check Node Operation for Extended Min-Sum Algorithm

  • Park, Kyeongbin;Chung, Ki-Seok
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.15 no.2
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    • pp.485-499
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    • 2021
  • Although non-binary low-density parity-check (NB-LDPC) codes have better error-correction capability than that of binary LDPC codes, their decoding complexity is significantly higher. Therefore, it is crucial to reduce the decoding complexity of NB-LDPC while maintaining their error-correction capability to adopt them for various applications. The extended min-sum (EMS) algorithm is widely used for decoding NB-LDPC codes, and it reduces the complexity of check node (CN) operations via message truncation. Herein, we propose a low-cost CN processing method to reduce the complexity of CN operations, which take most of the decoding time. Unlike existing studies on low complexity CN operations, the proposed method employs quick selection algorithm, thereby reducing the hardware complexity and CN operation time. The experimental results show that the proposed selection-based CN operation is more than three times faster and achieves better error-correction performance than the conventional EMS algorithm.

Maximizing the Selection Response by Optimal Quantitative Trait Loci Selection and Control of Inbreeding in a Population with Different Lifetimes between Sires and Dams

  • Tang, G.Q.;Li, X.W.;Zhu, L.;Shuai, S.R.;Bai, L.
    • Asian-Australasian Journal of Animal Sciences
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    • v.21 no.11
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    • pp.1559-1571
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    • 2008
  • A rule was developed to constrain the annual rate of inbreeding to a predefined value in a population with different lifetimes between sires and dams, and to maximize the selection response over generations. This rule considers that the animals in a population should be divided into sex-age classes based on the theory of gene flow, and restricts the increase of average inbreeding coefficient for new offspring by limiting the increase of the mean additive genetic relationship for parents selected. The optimization problem of this rule was formulated as a quadratic programming problem. Inputs for the rule were the BLUP estimated breeding values, the additive genetic relationship matrix of all animals, and the long-term contributions of sex-age classes. Outputs were optimal number and contributions of selected animals. In addition, this rule was combined with the optimization of emphasis given to QTL, and further increased the genetic gain over the planning horizon. Stochastic simulations of closed nucleus schemes for pigs were used to investigate the potential advantages obtained from this rule by combining the standard QTL selection, optimal QTL selection and conventional BLUP selection. Results showed that the predefined rates of inbreeding were actually achieved by this rule in three selection strategies. The rule obtained up to 9.23% extra genetic gain over truncation selection at the same rates of inbreeding. The combination of the extended rule and the optimization of emphasis given to QTL allowed substantial increases in selection response at a fixed annual rate of inbreeding, and solved substantially the conflict between short-term and long-term selection response in QTL-assisted selection schemes.

A New Tailored Sinc Pulse and Its Use for Multiband Pulse Design

  • Park, Jinil;Park, Jang-Yeon
    • Investigative Magnetic Resonance Imaging
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    • v.20 no.1
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    • pp.27-35
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    • 2016
  • Purpose: Among RF pulses, a sinc pulse is typically used for slice selection due to its frequency-selective feature. When a sinc pulse is implemented in practice, it needs to be apodized to avoid truncation artifacts at the expense of broadening the transition region of the excited-band profile. Here a sinc pulse tailored by a new apodization function is proposed that produces a sharper transition region with well suppression of truncation artifacts in comparison with conventional tailored sinc pulses. A multiband pulse designed using this newly apodized sinc pulse is also suggested inheriting the better performance of the newly apodized sinc pulse. Materials and Methods: A new apodization function is introduced to taper a sinc pulse, playing a role to slightly shift the first zero-crossing of a tailored sinc pulse from the peak of the main lobe and thereby producing a narrower bandwidth as well as a sharper pass-band in the excitation profile. The newly apodized sinc pulse was also utilized to design a multiband pulse which inherits the performance of its constituent. Performances of the proposed sinc pulse and the multiband pulse generated with it were demonstrated by Bloch simulation and phantom imaging. Results: In both simulations and experiments, the newly apodized sinc pulse yielded a narrower bandwidth and a sharper transition of the pass-band profile with a desirable degree of side-lobe suppression than the commonly used Hanning-windowed sinc pulse. The multiband pulse designed using the newly apodized sinc pulse also showed the better performance in multi-slice excitation than the one designed with the Hanning-windowed sinc pulse. Conclusion: The new tailored sinc pulse proposed here provides a better performance in slice (or slab) selection than conventional tailored sinc pulses. Thanks to the availability of analytical expression, it can also be utilized for multiband pulse design with great flexibility and readiness in implementation, transferring its better performance.

A Study of the Relationship Between Cognitive Ability and Information Searching Performance

  • Kim, Chang-Suk
    • Journal of Korean Library and Information Science Society
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    • v.35 no.1
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    • pp.303-317
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    • 2004
  • The purpose of this study was to develop a framework for predicting searching performance through an understanding of how cognitive ability relates to searching process and outcome. Specifically, this study examined the relationship between spatial visualization, logical reasoning, integrative reasoning, and information searching process and outcome. Information searching process was assessed by seven search process indicators: (1) search command selection: (2) combination of search commands; (3) application of Boolean logic: (4) application of truncation; (5) use of limit search function; (6) number of search statements; and (7) number of search errors made. Searching outcome was assessed by the number of correct answers to search questions. Subjects first took three standardized cognitive tests that measured cognitive abilities, and performed online catalog searching in response to seven information search questions. The searches were logged using Lotus ScreenCam, and reviewed for the analysis. Factor analysis was used to find underlying structures of the seven search process variables. Multiple regression analysis was applied to examine the predictive power of three cognitive variables on three extracted factors, and search outcome. Results of the data analysis showed that individual differences in logical reasoning could predict information searching process and outcome.

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Improvement of Set Partitioning Sorting Algorithm for Image Compression in Embedded System (임베디드 시스템의 영상압축을 위한 분할정렬 알고리즘의 개선)

  • Kim, Jin-Man;Ju, Dong-Hyun;Kim, Doo-Young
    • Journal of the Institute of Convergence Signal Processing
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    • v.6 no.3
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    • pp.107-111
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    • 2005
  • With the increasing use of multimedia technologies, image compression requires higher performance as well as new functionality in the informationized society. Specially, in the specific area of still image encoding in embedded system, a new standard, JPEG2000 that improve various problem of JPEG was developed. This paper proposed a method that reduce quantity of data delivered in EBCOT(Embedded Block Coding with Optimized Truncation) process using SPIHT(Set Partitioning in Hierarchical Trees) Algorithm to optimize selection of threshold from feature of wavelet transform coefficients and to remove sign bit in LL area for the increment of compression efficiency on JPEG2000. The experimental results showed the proposed algorithm achieves more improved bit rate in embedded system.

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Genetic Gain and Diversity in a Clonal Seed Orchard of Pinus Koraiensis Under Various Thinning Intensities (잣나무 클론 채종원에서 간벌 강도에 따른 개량효과와 유전다양성)

  • Oh, C.Y.;Han, S.U.;Kim, C.S.;Kang, K.S.;Lee, B.S.
    • Korean Journal of Breeding Science
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    • v.40 no.3
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    • pp.263-268
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    • 2008
  • Estimates of genetic gain (in volume growth) and diversity (expressed as status number, $N_s$) were determined in a clonal seed orchard of Pinus koraiensis. The genetic thinning was based on clonal breeding values (represented by general combining ability) obtained from progeny tests, clonal fertility estimated by strobilus production, and clonal size variation determined by the ramet numbers per clone. Parental GCA values for volume growth were calculated, based on height and diameter at breast height measured from field trials. Clonal fertility was estimated from the assessments of strobilus production over twelve years from 1991 to 2003, and used for the calculation of status number. There are 179 clones and 5,268 ramets in 12ha area of P. koraiensis clonal seed orchard. Genetic gain and diversity estimates were determined under assumptions of 30% pollen contamination and inferior genetic value of contaminating pollen. Genetic gain increased as thinning rates were set from 10% to 60%. However, for the higher thinning intensities, the increase of genetic gain was not remarkable. Genetic thinning by means of truncation selection resulted in a greater genetic gain but a large decrease in status number. Status number was represented around 40 clones for 10% through 60% thinning intensities, but for the higher thinning intensities, it was a bit fluctuated. Based on the present results, it could be concluded that thinning rate should not be stronger than 60% to optimize genetic gain while conserving genetic diversity. Consequently 50% or 60% thinning rate might be appropriate for genetic thinning in the clonal seed orchard of P. koraiensis. The effect of pollen contamination on the genetic gain and the consequence of genetic thinning for seed production in the clonal seed orchard, and seed orchard management scheme were also discussed.