• Title/Summary/Keyword: grouped data

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Effect of Normalization on Detection of Differentially-Expressed Genes with Moderate Effects

  • Cho, Seo-Ae;Lee, Eun-Jee;Kim, Young-Chul;Park, Tae-Sung
    • Genomics & Informatics
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    • v.5 no.3
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    • pp.118-123
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    • 2007
  • The current existing literature offers little guidance on how to decide which method to use to analyze one-channel microarray measurements when dealing with large, grouped samples. Most previous methods have focused on two-channel data;therefore they can not be easily applied to one-channel microarray data. Thus, a more reliable method is required to determine an appropriate combination of individual basic processing steps for a given dataset in order to improve the validity of one-channel expression data analysis. We address key issues in evaluating the effectiveness of basic statistical processing steps of microarray data that can affect the final outcome of gene expression analysis without focusingon the intrinsic data underlying biological interpretation.

Probabilistic Approach on Railway Infrastructure Stability and Settlement Analysis

  • Lee, Sangho
    • International Journal of Railway
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    • v.6 no.2
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    • pp.45-52
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    • 2013
  • Railway construction needs vast soil investigation for its infrastructure foundation designs along the planned railway path to identify the design parameters for stability and serviceability checks. The soil investigation data are usually classified and grouped to decide design input parameters per each construction section and budget estimates. Deterministic design method which most civil engineer and practitioner are familiar with has a clear limitation in construction/maintenance budget control, and occasionally produced overdesigned or unsafe design problems. Instead of using a batch type analysis with predetermined input parameters, data population collected from site soil investigation and design load condition can be statistically estimated for the mean and variance to present the feature of data distribution and optimized with a best fitting probability function. Probabilistic approach using entire feature of design input data enables to predict the worst, best and most probable cases based on identified ranges of soil and load data, which will help railway designer select construction method to save the time and cost. This paper introduces two Monte Carlo simulations actually applied on estimation of retaining wall external stability and long term settlement of organic soil in soil investigation area for a recent high speed railway project.

Vegetative Compatibility Groups and Pathogenicity Variation among Isolates of Fusarium oxysporum f.sp. melonis

  • Ahn, Il-Pyung;Lee, Yong-Hwan
    • The Plant Pathology Journal
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    • v.16 no.4
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    • pp.227-230
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    • 2000
  • A total of 90 isolates of Fusarium oxysporum f.sp. melonis, the causal agent of oriental melon (Cucumis melo var. makuwa) wilt, was isolated from symptomatic tissues of oriental melon from 4 provinces in Korea. These isolates were grouped into vegetative compatibility groups (VCGs) by demonstrating heterokaryosis through complementation using nitrate nonutilizing (nit) mutants. No self-incompatibility was observed in any of isolates. All isolates were grouped into 3 VCGs ; A, B, and C. iSOLATES BELONGING TO VCG A and VCG B accounted for 87% and 91% of the fungal population collected in 1991 and 1993, respectively. As the increment of cultivation period in the same field, the proportion of isolates belonging to VCG B increased whereas that of isolates belonging to VCG A decreased. Mean virulence of a total population increased as the increment of cultivation period in the same field. Isolates belonging to VCG B showed the highest increment of virulence. These data suggest that replanting of a host plant in the same field may cause increase of virulence in the pathogens. Furthermore, virulence of F. oxysporum f.sp. melonis isolates is related to the VCGs.

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Molecular Phylogeny of Syngnathiformes Fishes Inferred from Mitochondrial Cytochrome b DNA Sequences (실고기목 어류 (Syngnathiformes)의 분자계통학적 분류)

  • KOH Beom Seok;SONG Choon Bok
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.37 no.5
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    • pp.405-413
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    • 2004
  • The previous morphology-based taxonomic frameworks within the family Syngnathidae had emphasized the significance of the male brood pouch and reproductive biology in defining the group. However, several different hypotheses had been proposed by different investigators. This study has been carried out to determine the phylogenetic relationships among 19 species belonging to the order Syngnathiformes with three Gasterosteiformes species as outgroup taxa by using the mitochondrial cytochrome b DNA sequences. Phylogenetic analyses based on neighbor-joining distance, maximum parsimony, minimum evolution and maximum likelihood method strongly supported that the family Syngnathidae, the suborder Syngnathoidei and the order Syngnathiformes were all monophyletic group. Although much of previous morphological analyses were supported by our molecular data, there were some significant discrepancies between molecular and morphological work. Such an interesting result was that the weedy seadragon (Phyllopteryx taeniolatus) strongly grouped together with the New Zealand pot-belly seahorse (Hippocampus abdominalis). Considering the markedly different brooding structure between them, this unexpected result might be explained whether by multiple independent origins of brooding structure or by hybridization between the female Hippocampus and other syngnathid species having individual membranous egg compartment. In addition, the suborder Aulostomoidei was paraphyletic group because the shrimpfish (Aeliscus strigatus), belonging to the family Centriscidae, always grouped together with the family Syngnathidae as a sister taxon.

Optimal Operation of the Grouped Agricultural-Reservoirs (농업용 저수지군의 최적 운영)

  • 이기춘;최진규;이장춘;손재권
    • Magazine of the Korean Society of Agricultural Engineers
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    • v.33 no.4
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    • pp.52-60
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    • 1991
  • This study was conducted to investigate the appropriate operation method minimizing the deviation between irrigation water demand and release from the reservoirs, and the simulation technique was used in the operation model. This model was applied to the grouped reservoirs system consisted of Dongsang, Daia and Keungchun reservoirs and Eowoo-weir in Chonbuk FLIA district. The results obtained in this study are summarized as follows; 1.The area above the Eowoo weir point was divided into 6 small watersheds, and daily inflows from each watershed were calculated by Tank model. It showed that the average annual runoff ratio was 40-60% respectively. 2.Based on the Blaney-Criddle formula daily water requirement of Chonbuk FLIA irrigation area was estimated, mean water requirement for paddy field during the irrigation period was 818.lmm. 3.Using the basic data such as inflow and water demand, four different release types were selected. Through the simulated operation the difference between intake water required at Eowoo-weir point and release from the 3 reservoirs was estimated. The best result was obtained when Daia and Keungchun reservoirs are operated parallelly at fixed release ratio and the release of Dongsang reservoir was determined according to the storage of Daia reservoir.

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Prediction of compressive strength of concrete using neural networks

  • Al-Salloum, Yousef A.;Shah, Abid A.;Abbas, H.;Alsayed, Saleh H.;Almusallam, Tarek H.;Al-Haddad, M.S.
    • Computers and Concrete
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    • v.10 no.2
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    • pp.197-217
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    • 2012
  • This research deals with the prediction of compressive strength of normal and high strength concrete using neural networks. The compressive strength was modeled as a function of eight variables: quantities of cement, fine aggregate, coarse aggregate, micro-silica, water and super-plasticizer, maximum size of coarse aggregate, fineness modulus of fine aggregate. Two networks, one using raw variables and another using grouped dimensionless variables were constructed, trained and tested using available experimental data, covering a large range of concrete compressive strengths. The neural network models were compared with regression models. The neural networks based model gave high prediction accuracy and the results demonstrated that the use of neural networks in assessing compressive strength of concrete is both practical and beneficial. The performance of model using the grouped dimensionless variables is better than the prediction using raw variables.

A Grounded Theory Approach to the Adjustment Process of the Institutionalized Elderly : The Control of Reluctance (시설노인의 적응과정에 대한 근거이론적 접근 : 거부감 다스리기)

  • 이가언
    • Journal of Korean Academy of Nursing
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    • v.32 no.5
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    • pp.624-632
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    • 2002
  • The number of residents in elderly institution has been increasing due to the change of the family support system. This study was focused on understanding the process of adjustment of the institutionalized elderly using the Grounded Theory approach. Method: There were seven participants, 4 men and 3 women living in 3 different elderly facilities. The data was collected through in-depth interviews and participant observation from June 20, 1999 to January 10, 2000 and analyzed by the Strauss and Corbin's analysis method. Result: 125 concepts were found and grouped into 30 sub-categories and then grouped into 13 categories. These categories are , , , , , , , , , , , and , which were synthesized into the process of adjustment. being the core category. The adjustment process of the facility elderly consisted of : 1. expressive phase of 'reluctance' 2. control phase of 'reluctance' 3. latent phase of 'reluctance' Conclusion: This study offers better understandings on the adjustment process of the institutionalized elderly and provides more appropriate nursing care to the New Comers of these facilities.

Consumers' Dissatisfaction Factors with Dress Shoes According to Consumers' Characteristics - Purchase and Consumption Stages - (소비자 특성에 따른 숙녀화 불만족 요인 연구 -구매시와 구매후 사용과정을 중심으로-)

  • Kim, Min;Kim, Mi-Sook
    • Journal of the Korean Society of Clothing and Textiles
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    • v.22 no.6
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    • pp.725-736
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    • 1998
  • The purposes of this study were to identify the dimensions of consumers' dissatisfaction with dress shoes when purchase and while using them, and to examine the differences in dissatisfaction factors among consumers grouped by age, occupation and purchasing characteristics. A questionnaire consisted of 86 consumer's dissatisfaction statements with purchasing and using women's dress shoes was developed after conducting 3 pilot tests, and administered to 5BO women in age between 20 and 60 years residing in Seoul and the metropolitan areas in June, 1997, 457 were used for data analysis. Ten factors of dissatisfaction with the women's dress shoes when buying them were identified: attitudes of salespersons, bargain sales, variety of styles, store environment, inconvenience in using girt certificates, fashion. advertisement, display, design, and size. During purchase stage, consumers grouped by demographic characteristics and purchase behaviors showed significant differences in design, attitudes of salespersons, store environment, and selected dissatisfaction factors. Nine dissatisfaction factors with using dress shoes were identified: physical discomfort, after-service, distort of shape, low quality, surface defects, suede/ wearing out, fit, inferiority of color and texture/walking discomforts. During consumption stage, consumers with different demographic characteristics and purchase behaviors were found significantly different in physical discomfort, fit, and selected dissatisfaction factors.

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Drought Forecasting with Regionalization of Climate Variables and Generalized Linear Model

  • Yejin Kong;Taesam Lee;Joo-Heon Lee;Sejeong Lee
    • Proceedings of the Korea Water Resources Association Conference
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    • 2023.05a
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    • pp.249-249
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    • 2023
  • Spring drought forecasting in South Korea is essential due to the sknewness of rainfall which could lead to water shortage especially in spring when managed without prediction. Therefore, drought forecasting over South Korea was performed in the current study by thoroughly searching appropriate predictors from the lagged global climate variable, mean sea level pressure(MSLP), specifically in winter season for forecasting time lag. The target predictand defined as accumulated spring precipitation(ASP) was driven by the median of 93 weather stations in South Korea. Then, it was found that a number of points of the MSLP data were significantly cross-correlated with the ASP, and the points with high correlation were regionally grouped. The grouped variables with three regions: the Arctic Ocean (R1), South Pacific (R2), and South Africa (R3) were determined. The generalized linear model(GLM) was further applied for skewed marginal distribution in drought prediction. It was shown that the applied GLM presents reasonable performance in forecasting ASP. The results concluded that the presented regionalization of the climate variable, MSLP can be a good alternative in forecasting spring drought.

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IoT data processing techniques based on machine learning optimized for AIoT environments (AIoT 환경에 최적화된 머신러닝 기반의 IoT 데이터 처리 기법)

  • Jeong, Yoon-Su;Kim, Yong-Tae
    • Journal of Industrial Convergence
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    • v.20 no.3
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    • pp.33-40
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    • 2022
  • Recently, IoT-linked services have been used in various environments, and IoT and artificial intelligence technologies are being fused. However, since technologies that process IoT data stably are not fully supported, research is needed for this. In this paper, we propose a processing technique that can optimize IoT data after generating embedded vectors based on machine learning for IoT data. In the proposed technique, for processing efficiency, embedded vectorization is performed based on QR such as index of IoT data, collection location (binary values of X and Y axis coordinates), group index, type, and type. In addition, data generated by various IoT devices are integrated and managed so that load balancing can be performed in the IoT data collection process to asymmetrically link IoT data. The proposed technique processes IoT data to be orthogonalized based on hash so that IoT data can be asymmetrically grouped. In addition, interference between IoT data may be minimized because it is periodically generated and grouped according to IoT data types and characteristics. Future research plans to compare and evaluate proposed techniques in various environments that provide IoT services.