• Title/Summary/Keyword: high-dimensional data

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Similarity Measure Design on High Dimensional Data

  • Nipon, Theera-Umpon;Lee, Sanghyuk
    • Journal of the Korea Convergence Society
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    • v.4 no.1
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    • pp.43-48
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    • 2013
  • Designing of similarity on high dimensional data was done. Similarity measure between high dimensional data was considered by analysing neighbor information with respect to data sets. Obtained result could be applied to big data, because big data has multiple characteristics compared to simple data set. Definitely, analysis of high dimensional data could be the pre-study of big data. High dimensional data analysis was also compared with the conventional similarity. Traditional similarity measure on overlapped data was illustrated, and application to non-overlapped data was carried out. Its usefulness was proved by way of mathematical proof, and verified by calculation of similarity for artificial data example.

A Distance-based Outlier Detection Method using Landmarks in High Dimensional Data (고차원 데이터에서 랜드마크를 이용한 거리 기반 이상치 탐지 방법)

  • Park, Cheong Hee
    • Journal of Korea Multimedia Society
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    • v.24 no.9
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    • pp.1242-1250
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    • 2021
  • Detection of outliers deviating normal data distribution in high dimensional data is an important technique in many application areas. In this paper, a distance-based outlier detection method using landmarks in high dimensional data is proposed. Given normal training data, the k-means clustering method is applied for the training data in order to extract the centers of the clusters as landmarks which represent normal data distribution. For a test data sample, the distance to the nearest landmark gives the outlier score. In the experiments using high dimensional data such as images and documents, it was shown that the proposed method based on the landmarks of one-tenth of training data can give the comparable outlier detection performance while reducing the time complexity greatly in the testing stage.

Extended High Dimensional Clustering using Iterative Two Dimensional Projection Filtering (반복적 2차원 프로젝션 필터링을 이용한 확장 고차원 클러스터링)

  • Lee, Hye-Myeong;Park, Yeong-Bae
    • The KIPS Transactions:PartD
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    • v.8D no.5
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    • pp.573-580
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    • 2001
  • The large amounts of high dimensional data contains a significant amount of noises by it own sparsity, which adds difficulties in high dimensional clustering. The CLIP is developed as a clustering algorithm to support characteristics of the high dimensional data. The CLIP is based on the incremental one dimensional projection on each axis and find product sets of the dimensional clusters. These product sets contain not only all high dimensional clusters but also they may contain noises. In this paper, we propose extended CLIP algorithm which refines the product sets that contain cluster. We remove high dimensional noises by applying two dimensional projections iteratively on the already found product sets by CLIP. To evaluate the performance of extended algorithm, we demonstrate its effectiveness through a series of experiments on synthetic data sets.

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Multivariate Procedure for Variable Selection and Classification of High Dimensional Heterogeneous Data

  • Mehmood, Tahir;Rasheed, Zahid
    • Communications for Statistical Applications and Methods
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    • v.22 no.6
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    • pp.575-587
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    • 2015
  • The development in data collection techniques results in high dimensional data sets, where discrimination is an important and commonly encountered problem that are crucial to resolve when high dimensional data is heterogeneous (non-common variance covariance structure for classes). An example of this is to classify microbial habitat preferences based on codon/bi-codon usage. Habitat preference is important to study for evolutionary genetic relationships and may help industry produce specific enzymes. Most classification procedures assume homogeneity (common variance covariance structure for all classes), which is not guaranteed in most high dimensional data sets. We have introduced regularized elimination in partial least square coupled with QDA (rePLS-QDA) for the parsimonious variable selection and classification of high dimensional heterogeneous data sets based on recently introduced regularized elimination for variable selection in partial least square (rePLS) and heterogeneous classification procedure quadratic discriminant analysis (QDA). A comparison of proposed and existing methods is conducted over the simulated data set; in addition, the proposed procedure is implemented to classify microbial habitat preferences by their codon/bi-codon usage. Five bacterial habitats (Aquatic, Host Associated, Multiple, Specialized and Terrestrial) are modeled. The classification accuracy of each habitat is satisfactory and ranges from 89.1% to 100% on test data. Interesting codon/bi-codons usage, their mutual interactions influential for respective habitat preference are identified. The proposed method also produced results that concurred with known biological characteristics that will help researchers better understand divergence of species.

Dimension Reduction Methods on High Dimensional Streaming Data with Concept Drift (개념 변동 고차원 스트리밍 데이터에 대한 차원 감소 방법)

  • Park, Cheong Hee
    • KIPS Transactions on Software and Data Engineering
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    • v.5 no.8
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    • pp.361-368
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    • 2016
  • While dimension reduction methods on high dimensional data have been widely studied, research on dimension reduction methods for high dimensional streaming data with concept drift is limited. In this paper, we review incremental dimension reduction methods and propose a method to apply dimension reduction efficiently in order to improve classification performance on high dimensional streaming data with concept drift.

Demension reduction for high-dimensional data via mixtures of common factor analyzers-an application to tumor classification

  • Baek, Jang-Sun
    • Journal of the Korean Data and Information Science Society
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    • v.19 no.3
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    • pp.751-759
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    • 2008
  • Mixtures of factor analyzers(MFA) is useful to model the distribution of high-dimensional data on much lower dimensional space where the number of observations is very large relative to their dimension. Mixtures of common factor analyzers(MCFA) can reduce further the number of parameters in the specification of the component covariance matrices as the number of classes is not small. Moreover, the factor scores of MCFA can be displayed in low-dimensional space to distinguish the groups. We propose the factor scores of MCFA as new low-dimensional features for classification of high-dimensional data. Compared with the conventional dimension reduction methods such as principal component analysis(PCA) and canonical covariates(CV), the proposed factor score was shown to have higher correct classification rates for three real data sets when it was used in parametric and nonparametric classifiers.

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High-Dimensional Clustering Technique using Incremental Projection (점진적 프로젝션을 이용한 고차원 글러스터링 기법)

  • Lee, Hye-Myung;Park, Young-Bae
    • Journal of KIISE:Databases
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    • v.28 no.4
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    • pp.568-576
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    • 2001
  • Most of clustering algorithms data to degenerate rapidly on high dimensional spaces. Moreover, high dimensional data often contain a significant a significant of noise. which causes additional ineffectiveness of algorithms. Therefore it is necessary to develop algorithms adapted to the structure and characteristics of the high dimensional data. In this paper, we propose a clustering algorithms CLIP using the projection The CLIP is designed to overcome efficiency and/or effectiveness problems on high dimensional clustering and it is the is based on clustering on each one dimensional subspace but we use the incremental projection to recover high dimensional cluster and to reduce the computational cost significantly at time To evaluate the performance of CLIP we demonstrate is efficiency and effectiveness through a series of experiments on synthetic data sets.

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A study on high dimensional large-scale data visualization (고차원 대용량 자료의 시각화에 대한 고찰)

  • Lee, Eun-Kyung;Hwang, Nayoung;Lee, Yoondong
    • The Korean Journal of Applied Statistics
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    • v.29 no.6
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    • pp.1061-1075
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    • 2016
  • In this paper, we discuss various methods to visualize high dimensional large-scale data and review some issues associated with visualizing this type of data. High-dimensional data can be presented in a 2-dimensional space with a few selected important variables. We can visualize more variables with various aesthetic attributes in graphics or use the projection pursuit method to find an interesting low-dimensional view. For large-scale data, we discuss jittering and alpha blending methods that solve any problem with overlapping points. We also review the R package tabplot, scagnostics, and other R packages for interactive web application with visualization.

Optimized Entity Attribute Value Model: A Search Efficient Re-presentation of High Dimensional and Sparse Data

  • Paul, Razan;Latiful Hoque, Abu Sayed Md.
    • Interdisciplinary Bio Central
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    • v.3 no.3
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    • pp.9.1-9.5
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    • 2011
  • Entity Attribute Value (EAV) is the widely used solution to represent high dimensional and sparse data, but EAV is not search efficient for knowledge extraction. In this paper, we have proposed a search efficient data model: Optimized Entity Attribute Value (OEAV) for physical representation of high dimensional and sparse data as an alternative of widely used EAV. We have implemented both EAV and OEAV models in a data warehousing en-vironment and performed different relational and warehouse queries on both the models. The experimental results show that OEAV is dramatically search efficient and occupy less storage space compared to EAV.

A small review and further studies on the LASSO

  • Kwon, Sunghoon;Han, Sangmi;Lee, Sangin
    • Journal of the Korean Data and Information Science Society
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    • v.24 no.5
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    • pp.1077-1088
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    • 2013
  • High-dimensional data analysis arises from almost all scientific areas, evolving with development of computing skills, and has encouraged penalized estimations that play important roles in statistical learning. For the past years, various penalized estimations have been developed, and the least absolute shrinkage and selection operator (LASSO) proposed by Tibshirani (1996) has shown outstanding ability, earning the first place on the development of penalized estimation. In this paper, we first introduce a number of recent advances in high-dimensional data analysis using the LASSO. The topics include various statistical problems such as variable selection and grouped or structured variable selection under sparse high-dimensional linear regression models. Several unsupervised learning methods including inverse covariance matrix estimation are presented. In addition, we address further studies on new applications which may establish a guideline on how to use the LASSO for statistical challenges of high-dimensional data analysis.