• Title/Summary/Keyword: marine biology

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Expressed Sequence Tags Analysis of Black Rockfish (Sebastes schlegeli) Peripheral Leukocytes Stimulated with Con A/PMA or LPS

  • Baeck, Gun-Wook;Kim, Ju-Won;Kim, Ki-Hyuk;Jun, Kwan-Yong;An, Geun-Hee;Park, Chan-Il
    • Journal of fish pathology
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    • v.21 no.2
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    • pp.129-137
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    • 2008
  • We constructed a black rockfish (Sebastes schlegeli) leukocyte cDNA library and a total of 386 expressed sequence tag (EST) clones were generated. Gene annotation procedures and homology searches of the sequenced ESTs were locally done by BLASTX for amino acid similarity comparisons. Of the 386 EST clones, 199 different ESTs showed significant homology to previously described genes while 97 ESTs were unidentified, hypothetical, or unnamed proteins. Encoding 38 different sequences were identified as putative bio-defense genes or genes associated with immune response.

Marinebio Industry review and Strategy Analysis of Chungnam Province (충남 해양바이오산업 현황과 전략 분석)

  • Jung, Myung-Hwa;Cha, Seon-Heui
    • Journal of Marine Bioscience and Biotechnology
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    • v.13 no.1
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    • pp.20-27
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    • 2021
  • Ironically, marine bioresource production in Chungnam Province is the second-largest in the country. The province's marine bioresource production puts its lack of a marine bioindustry in the spotlight despite the region's favorable conditions to produce representative value-added and (ultra) high value-added products such as neutraceutical and/or pharmaceutical function. This juxtaposition is to be expected, as there are no institutions for training professionals in the field of marine biology or in the fisheries industry in the West Sea area. The unique features of the region require individuals with specialized training who have been educated in accordance with regional development and the specificity of the region. Recently, however, a plan has been initiated at the national level to foster the growth of the marine biology industry in the Chungnam Province on Korea's west coast. This plan includes increasing funds to the marine biology market to 1.2 trillion by 2030. If the Chungnam region wants to successfully revitalize the marine biology industry and put the increased funds to efficient use, it must first establish various research and (business) development (R&(B)D) plans regarding local marine biology infrastructures and marine biology programs at local universities. It must also focus on training specialists to protect, maintain, and develop the region's marine bio-resources to increase the growth of the region's bioindustry.

Marine Biotechnology: from Molecules to Aquaculture and Biomedicine

  • Chen, Thomas T.;Chun, Chang Zoon;Chiou, Peter;Chen, Maria J.
    • Journal of Marine Bioscience and Biotechnology
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    • v.1 no.1
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    • pp.1-8
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    • 2006
  • Marine biotechnology encompasses biotechnology in areas such as marine microbiology, biomedical important marine natural products, organisms in extreme environments, and aquaculture. Marine biotechnology, today, poised to flourish more than ever from the confluences that are occurring in fundamental research in modern biology and other areas of science. Using research results from our laboratory and those from others, we will review the current advances of marine biotechnology in this lecture.

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Preliminary EST analysis of immune-relevant genes from the liver of LPS-stimulated rock bream Oplegnathus fasciatus

  • Kim, Ju-Won;Park, Hyung-Jun;Baeck, Gun-Wook;Park, Chan-Il
    • Journal of fish pathology
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    • v.23 no.2
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    • pp.229-238
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    • 2010
  • We constructed a rock bream (Oplegnathus fasciatus) liver cDNA library and a total of 1533 expressed sequence tag (EST) clones were generated. Gene annotation procedures and homology searches of the sequenced ESTs were analyzed using BLASTX. Of the 1533 EST clones, 1165 different ESTs showed significant homology to previously described genes while 368 ESTs were unidentified, hypothetical, or unnamed proteins. Encoding 106 different sequences were identified as putative bio-defense genes or genes associated with immune response.

New Record of a Marine Algal Species, Membranoptera alata (Delesseriaceae) in Korea

  • Kang, Pil Joon;An, Jae Woo;Nam, Ki Wan
    • Korean Journal of Environmental Biology
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    • v.36 no.3
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    • pp.314-318
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    • 2018
  • A marine algal species was collected from Sacheonjin, Gangneung located on the eastern coast of Korea during a survey of marine algal flora. This alga shares the generic features of Membranoptera belonging to the subfamily Delesserioideae and is characterized by the presence of combined features of membranous, monostromatic thalli attached by a solid discoid holdfast, blades with a conspicuous terete stipe-like midrib and microscopic lateral veins, entire margins, irregularly alternate to dichotomous branching, and obtuse apices growing apically. In a phylogenetic tree based on rbcL sequences, the Korean alga nests in the same clade with M. alata from the eastern North Atlantic. The genetic distance between both the sequences within the clade was calculated as 0.0%. Based on the morphological and molecular analyses, this Korean species is identified as the generic type, M. alata. This is the first record in the list of Korean marine algal flora.

Bacterial Diversity of Culturable Isolates from Seawater and a Marine Coral, Plexauridae sp., near Mun-Sum, Cheju-Island

  • Lee, Jung-Hyun;Shin, Hyun-Hee;Lee, Deuk-Soo;Kwon, Kae-Kyung;Kim, Sang-Jin;Lee, Hong-Kum
    • Journal of Microbiology
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    • v.37 no.4
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    • pp.193-199
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    • 1999
  • Fifty-eight strains showing different colony morphological characteristics on various media were isolated from marine coral (Plexauridae sp.) and ambient seawater near Mun-Sum, Cheju-Island in 1998. Bacterial diversity was studies by phylogenetic analysis of the partial 16S rRNA gene sequences. All isolates representing the bacterial domain included affiliates of the high G+C (59%) and los G+C (3%) subdivision of Gram positive bacteria, and the alpha (33%) and gamma (5%) subdivision of the Proteobacteria. The 16S rDNA sequence similarity of the isolates was in the 88.3 to 100% range (average, 95.6%) to reported sequence data. In the comparison of the isolates from marine coarl and ambient seawater, more diverse groups belonging to ${\alpha}$-Proteobacteria were preferentially obtained from seawater.

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Molecular characterization and expression of CD96 in red seabream (Pagrus major)

  • Won-Sik Woo;Kwang-Min Choi;Min-Soo Joo;Gyoungsik Kang;Kyung-Ho Kim;Ha-Jeong Son;Min-Young Sohn;Do-Hyung Kim;Chan-Il Park
    • Fisheries and Aquatic Sciences
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    • v.26 no.2
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    • pp.97-104
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    • 2023
  • CD96 is a membrane-bound receptor discovered in humans in 1992 that is mainly present in natural killer cells and T cells derived from haematopoietic cells and performs immune functions. Based on the sequence of CD96 obtained from red seabream (Pagrus major), phylogenetic analysis with other species, infections of normal fish, Streptococcus iniae and red sea bream iridovirus (RSIV), and expression analysis was conducted using real-time polymerase chain reaction. Phylogenetic analysis showed the highest homology with Sparus aurata, and multiple sequence analysis confirmed the conservation of major domains between different fish species. Normal fish high expression results were confirmed in the head kidney, and spleen, which are the haematopoietic organs of the fish. High expression levels were confirmed in the gills, liver, spleen, and kidney on day three after RSIV infection. After S. iniae infection, high expression was confirmed in the gills and liver on day one, and high expression was confirmed in the spleen from 12 hours. These results show that PmCD96 functions as an immune gene in P. major and is considered a basic research case for CD96 in fish's hematopoietic organ immune system.