• Title/Summary/Keyword: miR396

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Biological roles and an evolutionary sketch of the GRF-GIF transcriptional complex in plants

  • Kim, Jeong Hoe
    • BMB Reports
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    • v.52 no.4
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    • pp.227-238
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    • 2019
  • GROWTH-REGULATING FACTORs (GRFs) are sequence-specific DNA-binding transcription factors that regulate various aspects of plant growth and development. GRF proteins interact with a transcription cofactor, GRF-INTERACTING FACTOR (GIF), to form a functional transcriptional complex. For its activities, the GRF-GIF duo requires the SWITCH2/SUCROSE NONFERMENTING2 chromatin remodeling complex. One of the most conspicuous roles of the duo is conferring the meristematic potential on the proliferative and formative cells during organogenesis. GRF expression is post-transcriptionally down-regulated by microRNA396 (miR396), thus constructing the GRF-GIF-miR396 module and fine-tuning the duo's action. Since the last comprehensive review articles were published over three years ago, many studies have added further insight into its action and elucidated new biological roles. The current review highlights recent advances in our understanding of how the GRF-GIF-miR396 module regulates plant growth and development. In addition, I revise the previous view on the evolutionary origin of the GRF gene family.

Small RNA Transcriptome of Hibiscus Syriacus Provides Insights into the Potential Influence of microRNAs in Flower Development and Terpene Synthesis

  • Kim, Taewook;Park, June Hyun;Lee, Sang-gil;Kim, Soyoung;Kim, Jihyun;Lee, Jungho;Shin, Chanseok
    • Molecules and Cells
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    • v.40 no.8
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    • pp.587-597
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    • 2017
  • MicroRNAs (miRNAs) are essential small RNA molecules that regulate the expression of target mRNAs in plants and animals. Here, we aimed to identify miRNAs and their putative targets in Hibiscus syriacus, the national flower of South Korea. We employed high-throughput sequencing of small RNAs obtained from four different tissues (i.e., leaf, root, flower, and ovary) and identified 33 conserved and 30 novel miRNA families, many of which showed differential tissuespecific expressions. In addition, we computationally predicted novel targets of miRNAs and validated some of them using 5' rapid amplification of cDNA ends analysis. One of the validated novel targets of miR477 was a terpene synthase, the primary gene involved in the formation of disease-resistant terpene metabolites such as sterols and phytoalexins. In addition, a predicted target of conserved miRNAs, miR396, is SHORT VEGETATIVE PHASE, which is involved in flower initiation and is duplicated in H. syriacus. Collectively, this study provides the first reliable draft of the H. syriacus miRNA transcriptome that should constitute a basis for understanding the biological roles of miRNAs in H. syriacus.

Selection of Probiotic Bacteria from Yulmoo Kimchi Using a Stimulated Human Intestinal Model System (인체장모델시스템에 의한 열무김치로부터 프로바이오틱스 균주 선발)

  • Kang, Mi-Ran;Kim, Da-Ram;Kim, Tae-Woon;Park, Sung-Hee;Kim, Hyun-Ju;Jang, Ja-Young;Han, Eung-Soo
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.41 no.3
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    • pp.396-401
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    • 2012
  • To select potent probiotics from lactic acid bacteria in Yulmoo Kimchi, an in vitro and stimulated human intestinal model system (SHIMS) test were performed. One Leuconostoc mesenteroides strain from five strains of Yulmoo Kimchi and one Lactobacillus plantarum from 12 strains of KCTC and KCCM were selected according to survival in acidic and bile salts conditions. Between the two species, Leu. mesentroides displayed higher survival activity in a SHIMS test. The strain was identified as Leu. mesentroides by 16S rRNA sequencing and was designated as Leu. mesentroides K01.

A Relationship between Burden of Clinical Nursing Instructor and Teaching Effectiveness (임상실습 지도자의 부담감과 교수 효율성과의 관계)

  • Son Haeng-Mi;Kim Sook-Young;Lee Hwa-In;Jun Eun-Mi;Han Shin-Hee
    • The Journal of Korean Academic Society of Nursing Education
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    • v.4 no.2
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    • pp.187-203
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    • 1998
  • The purpose of this study was to identify the correlation between burden and teaching effectiveness on clinical nursing practice. The subjects were collected 135 clinical nurses who have taught nursing students and worked at hospitals which have over 400 beds in Seoul, Inchon, and Kyoung-gi Do. The instruments used in this study were : the burden on clinical nursing education was measured by Montgomery (1985) developed and visual analogue scale, and effectiveness of clinical instruction was measured by Reeve (1994) developed. The results of this study were as follows. 1) Seeing that the general characteristics of participants : average ages we 32.8 years old, 29.6% of them have Catholics in religions. 75.6% of them were graduated from 3-year nursing college. 20.7% of nurses are working at the surgery ward and I.C.U in each. Clinical nursing career is average 10.03 years, clinical instructional career is 5.22 years, and clinical teaching time is 5.26 hours in a day. Contents of clinical teaching were composed of basic nursing skills 80.7%, orientation 78.5%, inspection(making rounds) 71.9%. 2) The mean score of the burden on clinical nursing instructor was 2.42 by Montgomery's scale and 4.69 by the visual analogue scale. Theses scores represented that subjects were not affected burden highly. The mean score of leaching effectiveness on clinical nursing education was 3.47 and the almost items were found to have higher level. 3) There is no statistically significant differences in the burden according to general characteristics. And the teaching effective ness on clinical nursing education according to general characteristics regarding the age, job position, clinical career and clinical educational time were shown statistically significant differences. 4) There is a negative correlation between the burden and teachin effectiveness on clinical nursing education with a correlation efficient(r=-0.396, p<0.01). Further study is recommended to explore the meaning of burden experiences of clinical instructor deeply and to identify the correlation between the burden of clinical instructor and teaching effectiveness as the job position, and to analysis differences in teaching effectiveness as subcategories.

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Bibliometric Analysis of Traditional Korean Medical Journals Registered with the National Research Foundations of Korea (한국연구재단에 등재된 한의학 학술지에 대한 계량서지학적 비교분석 연구)

  • Yea, Sang-Jun;Kim, Chul;Kim, Sang-Kyun;Jang, Hyun-Chul;Kim, Jin-Hyun;Jeon, Byoung-Uk;Jang, Yun-Ji;Seong, Bo-Seok;Song, Mi-Young
    • The Journal of Korean Medicine
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    • v.32 no.5
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    • pp.66-77
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    • 2011
  • Objectives: This study aimed to make preliminary data through the bibliometric analysis of journals registered by national research foundations of Korea for the improvement of traditional Korean medical (TKM) journals. Methods: We collected 4,396 articles from the OASIS database, which is composed of articles published by TKM societies and institutes. First, we analyzed the 'authors by year', 'average authors per article', 'articles by institute' and 'authors by institute' to get the author-related conditions. Second, we analyzed the 'reference type', 'cited times', 'IF with self citation' and 'IF without self citation' to get the citation condition. Results: First, we found that the journal order of total authors was KAOOMP (2362), KOMS (1189), and KAMS (967), and of average authors per article was KAMS (5.29), KOIMS (5.25), and KOMS (4.75). Second, we learned that the journal order of occupied article ratio by high rank institutes was SCMS (92.4%), MAS (90.03%), and KOPS (87.22%) and of occupied author ratio by high rank institutes was KOPMS (96.55%), MAS (95.19%), and SCMS (93.85%). Third, we analyzed the most highly cited reference type by journals and we found that OMCS was books, SCMS was oriental medical journals and the other 10 journals were not oriental medical journals. Finally, we observed that the journal order of self citation ratio was SCMS (16.79%), KMAS (11.77%), and OOGS (11.67%) and also that the IF order was KAMS (0.675), OOGS (0.546), and KAOH (0.430). Conclusions: Through this study we found that TKM research leans too much toward on oriental medical universities, so we insist that TKM R&D institutes must be expanded. We also found that the self citation ratio was high in TKM journals, so the ratio must be decreased to improve the quality of the TKM journals.