• Title/Summary/Keyword: principal component analysis

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A Penalized Principal Component Analysis using Simulated Annealing

  • Park, Chongsun;Moon, Jong Hoon
    • Communications for Statistical Applications and Methods
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    • v.10 no.3
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    • pp.1025-1036
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    • 2003
  • Variable selection algorithm for principal component analysis using penalty function is proposed. We use the fact that usual principal component problem can be expressed as a maximization problem with appropriate constraints and we will add penalty function to this maximization problem. Simulated annealing algorithm is used in searching for optimal solutions with penalty functions. Comparisons between several well-known penalty functions through simulation reveals that the HARD penalty function should be suggested as the best one in several aspects. Illustrations with real and simulated examples are provided.

Application of varimax rotated principal component analysis in quantifying some zoometrical traits of a relict cow

  • Pares-Casanova, P.M.;Sinfreu, I.;Villalba, D.
    • Korean Journal of Veterinary Research
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    • v.53 no.1
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    • pp.7-10
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    • 2013
  • A study was conducted to determine the interdependence among the conformation traits of 28 "Pallaresa" cows using principal component analysis. Originally 21 body linear measurements were obtained, from which eight traits are subsequently eliminated. From the principal components analysis, with raw varimax rotation of the transformation matrix, two principal components were extracted, which accounted for 65.8% of the total variance. The first principal component alone explained 51.6% of the variation, and tended to describe general size, while the second principal component had its loadings for back-sternal diameter. The two extracted principal components, which are traits related to dorsal heights and back-sternal diameter, could be considered in selection programs.

Application of Principal Component Analysis Prior to Cluster Analysis in the Concept of Informative Variables

  • Chae, Seong-San
    • Communications for Statistical Applications and Methods
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    • v.10 no.3
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    • pp.1057-1068
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    • 2003
  • Results of using principal component analysis prior to cluster analysis are compared with results from applying agglomerative clustering algorithm alone. The retrieval ability of the agglomerative clustering algorithm is improved by using principal components prior to cluster analysis in some situations. On the other hand, the loss in retrieval ability for the agglomerative clustering algorithms decreases, as the number of informative variables increases, where the informative variables are the variables that have distinct information(or, necessary information) compared to other variables.

Application of the supplementary principal component analysis for the 1982-1992 Korean Pro Baseball data (89-92 한국 프로야구의 각 팀과 부문별 평균 성적에 대한 추가적 주성분분석의 응용)

  • 최용석;심희정
    • The Korean Journal of Applied Statistics
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    • v.8 no.1
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    • pp.51-60
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    • 1995
  • Given an $n \times p$ data matrix, if we add the $p_s$ variables somewhat different nature than the p variables to this matrix, we have a new $n \times (p+p_s)$ data matrix. Because of these $p_s$ variables, the traditional principal component analysis can't provide its efficient results. In this study, to improve this problem we review the supplementary principal component analysis putting $p_s$ variables to supplementary variable. This technique is based on the algebraic and geometric aspects of the traditional principal component analysis. So we provide a type of statistical data analysis for the records of eight teams and fourteen fields of the 1982-1992 Korean Pro Baseball Data based on the supplementary principal component analysis and the traditional principal component analysis. And we compare the their results.

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Application of the Principal Component Analysis to Evaluate Concrete Condition Using Impact Resonance Test (충격공진을 이용한 콘크리트 상태 평가를 위한 주성분 분석의 적용)

  • Yoon, Young Geun;Oh, Tae Keun
    • Journal of the Korean Society of Safety
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    • v.34 no.5
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    • pp.95-102
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    • 2019
  • Non-destructive methods such as rebound hardness method and ultrasonic method are widely studied for evaluating the physical properties, condition and damage of concrete, but are not suitable for detecting delamination and cracks near the surface due to various constraints of the site as well as the accuracy. Therefore, in this study, the impact resonance method was applied to detect the separation cracks occurring near the surface of the concrete slab and bridge deck. As a next step, the principal component analysis were performed by extracting various features using the FFT data. As a result of principal component analysis, it was analyzed that the reliability was high in distinguishing defects in concrete. This feature extraction and application of principal component analysis can be used as basic data for future use of machine learning technique for the better accuracy.

Classification of honeydew and blossom honeys by principal component analysis of physicochemical parameters

  • Choi, Suk-Ho;Nam, Myoung Soo
    • Korean Journal of Agricultural Science
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    • v.47 no.1
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    • pp.67-81
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    • 2020
  • The physicochemical parameters of honey are used to determine the botanic origin of honey and to specify the composition criteria for honey in regulations and standards. The parameters of honeydew and blossom honeys from Korean beekeepers were determined to investigate whether they complied with the composition criteria for honey in the food code legislated by Korean authority and to establish the parameters which should be subjected to principal component analysis for improved differentiation of honeys. The fructose and glucose contents of the honeydew honey did not comply with the composition criteria. The ash content of the honey was closely correlated with CIE a* and CIE L* The principal component analysis of fructose to glucose ratio, CIE a*, CIE L*, ash content, free acidity, and fructose and glucose contents enabled classification of honeydew, chestnut, multifloral, and acacia honeys. Additional advantage of the principal component analysis (PCA) is that the physicochemical parameters, such as fructose to glucose ratio (F/G) and color, can be determined using the analytical instruments for composition criteria and quality control of honey. This study suggested that composition criteria for honeydew honey should be established in the food code in accordance with international standards. The principal component analysis reported in this study resulted in improved classification of the honeys from Korean beekeepers.

Predicting Korea Pro-Baseball Rankings by Principal Component Regression Analysis (주성분회귀분석을 이용한 한국프로야구 순위)

  • Bae, Jae-Young;Lee, Jin-Mok;Lee, Jea-Young
    • Communications for Statistical Applications and Methods
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    • v.19 no.3
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    • pp.367-379
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    • 2012
  • In baseball rankings, prediction has been a subject of interest for baseball fans. To predict these rankings, (based on 2011 data from Korea Professional Baseball records) the arithmetic mean method, the weighted average method, principal component analysis, and principal component regression analysis is presented. By standardizing the arithmetic average, the correlation coefficient using the weighted average method, using principal components analysis to predict rankings, the final model was selected as a principal component regression model. By practicing regression analysis with a reduced variable by principal component analysis, we propose a rank predictability model of a pitcher part, a batter part and a pitcher batter part. We can estimate a 2011 rank of pro-baseball by a predicted regression model. By principal component regression analysis, the pitcher part, the other part, the pitcher and the batter part of the ranking prediction model is proposed. The regression model predicts the rankings for 2012.

A Penalized Principal Components using Probabilistic PCA

  • Park, Chong-Sun;Wang, Morgan
    • Proceedings of the Korean Statistical Society Conference
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    • 2003.05a
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    • pp.151-156
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    • 2003
  • Variable selection algorithm for principal component analysis using penalized likelihood method is proposed. We will adopt a probabilistic principal component idea to utilize likelihood function for the problem and use HARD penalty function to force coefficients of any irrelevant variables for each component to zero. Consistency and sparsity of coefficient estimates will be provided with results of small simulated and illustrative real examples.

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Assessment and Classification of Korean Local Corn Lines by the Application of Principal Component Analysis (I) (Principal Component Analysis Method에 의(依)한 한국재래종(韓國在來種) 옥수수의 해석(解析) 및 계통분류(系統分類)(I))

  • Lee, In Sup;Choe, Bong Ho
    • Korean Journal of Agricultural Science
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    • v.8 no.2
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    • pp.139-151
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    • 1981
  • To obtain breeding materials 57 Korean local corn lines collected were assessed and classified by the application of principal component analysis. The results obtained were as follows. 1. In the result of principal component analysis for 27 characters, 67.1% and 88.6% of total variation could be appreciated by the first four and fir st ten principal component respectively. 2. According to the value of characters and principal components, contribution of characters to principal components were very variable. 3. Biological meaning of the principal component and plant type corresponded to the each principal component were explained clear by the correlation coefficients between principal components and characters. 4. 57 lines were classified into 4 lineal groups by the taxonomic distances.

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AN EFFICIENT ALGORITHM FOR SLIDING WINDOW BASED INCREMENTAL PRINCIPAL COMPONENTS ANALYSIS

  • Lee, Geunseop
    • Journal of the Korean Mathematical Society
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    • v.57 no.2
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    • pp.401-414
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    • 2020
  • It is computationally expensive to compute principal components from scratch at every update or downdate when new data arrive and existing data are truncated from the data matrix frequently. To overcome this limitations, incremental principal component analysis is considered. Specifically, we present a sliding window based efficient incremental principal component computation from a covariance matrix which comprises of two procedures; simultaneous update and downdate of principal components, followed by the rank-one matrix update. Additionally we track the accurate decomposition error and the adaptive numerical rank. Experiments show that the proposed algorithm enables a faster execution speed and no-meaningful decomposition error differences compared to typical incremental principal component analysis algorithms, thereby maintaining a good approximation for the principal components.