• Title/Summary/Keyword: rISC

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Expression, Purification, and Characterization of Iron-Sulfur Cluster Assembly Regulator IscR from Acidithiobacillus ferrooxidans

  • Zeng, Jia;Zhang, Ke;Liu, Jianshe;Qiu, Guanzhou
    • Journal of Microbiology and Biotechnology
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    • v.18 no.10
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    • pp.1672-1677
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    • 2008
  • IscR (iron-sulfur cluster regulator) has been reported to be a repressor of the iscRSUA operon, and in vitro transcription reactions have revealed that IscR has a repressive effect on the iscR promoter in the case of [$Fe_{2}S_{2}$] cluster loading. In the present study, the iscR gene from A. ferrooxidans ATCC 23270 was cloned and successfully expressed in Escherichia coli, and then purified by one-step affinity chromatography to homogeneity. The molecular mass of the IscR was 18 kDa by SDS-PAGE. The optical and EPR spectra results for the recombinant IscR confirmed that an iron-sulfur cluster was correctly inserted into the active site of the protein. However, no [$Fe_{2}S_{2}$] cluster was assembled in apoIscR with ferrous iron and sulfide in vitro. Therefore, the [$Fe_{2}S_{2}$] cluster assembly in IscR in vivo would appear to require scaffold proteins and follow the Isc "AUS" pathway.

IscR Modulates Catalase A (KatA) Activity, Peroxide Resistance, and Full Virulence of Pseudomonas aeruginosa PA14

  • Kim, Seol-Hee;Lee, Bo-Young;Lau, Gee W.;Cho, You-Hee
    • Journal of Microbiology and Biotechnology
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    • v.19 no.12
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    • pp.1520-1526
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    • 2009
  • We have identified the iscR (PA3815) gene encoding an iron-sulfur cluster assembly regulator homolog as one of the genes required for peroxide resistance in Pseudomonas aeruginosa PA14. Here, we present the phenotypic characterization of an iscR deletion mutant in terms of KatA expression, stress responses, and virulence. The iscR null mutant exhibited reduced KatA activity at the posttranslational level, hypersensitivity to hydrogen peroxide, and virulence-attenuation in Drosophila melanogaster and mouse peritonitis models. These phenotypes were fully restored by multicopy-based expression of katA. These results suggest that the requirement of IscR in P. aeruginosa is related to the proper activity of KatA, which is crucial for peroxide resistance and full virulence of this bacterium.

Identification of Pseudomonas aeruginosa Genes Crucial for Hydrogen Peroxide Resistance

  • Choi, Young-Seok;Shin, Dong-Ho;Chung, In-Young;Kim, Seol-Hee;Heo, Yun-Jeong;Cho, You-Hee
    • Journal of Microbiology and Biotechnology
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    • v.17 no.8
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    • pp.1344-1352
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    • 2007
  • An opportunistic human pathogen, Pseudomonas aeruginosa, contains the major catalase KatA, which is required to cope with oxidative and osmotic stresses. As an attempt to uncover the $H_2O_2$-dependent regulatory mechanism delineating katA gene expression, four prototrophic $H_2O_2$-sensitive mutants were isolated from about 1,500 TnphoA mutant clones of P. aeruginosa strain PA14. Arbitrary PCR and direct cloning of the transposon insertion sites revealed that one insertion is located within the katA coding region and two are within the coding region of oxyR, which is responsible for transcriptional activation of several antioxidant enzyme genes in response to oxidative challenges. The fourth insertion was within PA3815 (IscR), which encodes a homolog of the Escherichia coli iron-sulfur assembly regulator, IscR. The levels of catalase and SOD activities were significantly reduced in the iscR mutant, but not in the oxyR mutant, during the normal planktonic culture conditions. These results suggest that both IscR and OxyR are required for the optimal resistance to $H_2O_2$, which involves the expression of multiple antioxidant enzymes including KatA.

Effect of $H_2O_2$ on Alveolar Epithelial Barrier Properties (폐상피세포 장벽에 대한 $H_2O_2$의 영향)

  • Suh, Duk-Joon;Cho, Se-Heon;Kang, Chang-Woon
    • Tuberculosis and Respiratory Diseases
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    • v.40 no.3
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    • pp.236-249
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    • 1993
  • Background: Among the injurious agents to which the lung airspaces are constantly exposed are reactive species of oxygen. It has been widely believed that reactive oxygen species may be implicated in the etiology of lung injuries. In order to elucidated how this oxidant causes lung cell injury, we investigated the effects of exogenous $H_2O_2$ on alveolar epithelial barrier characteristics. Methods: Rat type II alveolar epithelial cells were plated onto tissue culture-treated polycarbonate membrane filters. The resulting confluent monolayers on days 3 and 4 were mounted in a modified Ussing chamber and bathed on both sides with HEPES-buffered Ringer solution. The changes in short-circuit current (Isc) and monolayer resistance (R) in response to the exogenous hydroperoxide were measured. To determine the degree of cellular catalase participation in protection against $H_2O_2$ injury to the barrier, experiments were repeated in the presence of 20 mM aminotriazole (ATAZ, an inhibitor of catalase) in the same bathing fluid as the hydroperoxide. Results: These monolayers have a high transepithelial resistance (>2000 ohm-$cm^2$) and actively transport $Na^+$ from apical fluid. $H_2O_2$(0-100 mM) was then delivered to either apical or basolateral fluid. Resulting indicated that $H_2O_2$ decreased Isc and R gradually in dose-dependent manner. The effective concentration of apical $H_2O_2$ at which Isc (or R) was decreased by 50% at one hour ($ED_{50}$) was about 4 mM. However, basolateral $H_2O_2$ exposure led to $ED_{50}$ for Isc (and R) of about 0.04 mM. Inhibition of cellular catalase yielded $ED_{50}$ for Isc (and R) of about 0.4 mM when $H_2O_2$ was given apically, while $ED_{50}$ for basolateral exposure to $H_2O_2$ did not change in the presence of ATAZ. The rate of $H_2O_2$ consumption in apical and basolateral bathing fluids was the same, while cellualr catalase activity rose gradually with time in culture. Conclusion: Our data suggest that basolateral $H_2O_2$ may affect directly membrane component (e.g., $Na^+,\;K^+$-ATPase) located on the basolateral cell surface. Apical $H_2O_2$, on the other hand, may be largely degraded by catalase as it passes through the cells before reaching these membrane components. We conclude that alveolar epithelial barrier integrity as measured by Isc and R are compromised by $H_2O_2$ being relatively sensitive to basolateral (and insensitive to apical) $H_2O_2$.

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Proposed Schemes for Image Sensors Compatibility in IEEE TG7r1 Image Sensor Communications

  • Nguyen, Trang;Hong, Chang Hyun;Jang, Yeong Min
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.41 no.7
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    • pp.799-808
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    • 2016
  • The IEEE 802.15.7r1 Task Group (TG7r1), known as the revision of the IEEE 802.15.7 Visible Light Communication standard targeting the commercial usage of visible light communication systems which mainly use either image sensors or cameras, is of interest in this paper. The vast challenge in Image Sensor Communications (ISC), as it has been addressed in the Technical Consideration Document (TCD) of the TG7r1, is the Image Sensor Compatibility to support the variety of different commercial cameras available on the market. The on-going ISC standard must adhere to compatible image sensors regulations. This paper brings an inside review of the TG7r1 and an inside look of related works on Image Sensor Communications. The paper analyzes the compatibility features by introducing a revised model of receiver to explain how those features are necessary. One of the most challenging but interesting features is the capability in being compatible to camera frame rates. The variation of camera frame rate is modeled from verified experimental results. Noticeably, three singular approaches to support frame rates compatibility, including temporal approach, spatial approach, and frequency-domain approach, are proposed on the paper along with concise definitions. Those schemes have been presented as valuable proposals on the call-for-proposal meeting series of the TG7r1 recently.

A Scientometric Social Network Analysis of International Collaborative Publications of All India Institute of Medical Sciences, India

  • Nishavathi, E.;Jeyshankar, R.
    • Journal of Information Science Theory and Practice
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    • v.8 no.3
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    • pp.64-76
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    • 2020
  • Scientometrics and social network analysis (SNA) measures were used to analyze the international scientific collaboration (ISC) of All India Institute of Medical Sciences (AIIMS) for a period of 10 years (2009-2018). The dataset consists of 19,622 records retrieved from the Scopus database. The mean degree of collaboration 0.95 implied that researchers of AIIMS tend to collaborate domestically (80.29%) and internationally (14.67%). The data exhibits a hyper authorship pattern, and a medium-size research team consists of 4 to 10 authors who contributed a maximum of 62.08% (12,182) publications. 71.97% of research findings are scattered in journal articles. The most preferred journals published 58.55% of medical literature. An undirected collaboration network is constructed in Pajek to study the ISC of AIIMS during the period 2009-2018 which consists of 179 vertices (Vn) and 11,938 edges. The degree centrality (Dc) identified that the United States of America (Dc - 54; CC - 0.99) and United Kingdom (Dc - 41; 0.98) are the most collaborative countries in the whole network as well as the most influential countries. The Louvain community detection method is used to detect influential research groups of AIIMS. The temporal evolution of ISC of AIIMS studied through scientometrics and SNA measures shed light on the structure and properties of ISC networks of AIIMS. It revealed that AIIMS, India has taken keen steps to enrich the quality of research by extending and encouraging the collaboration between institutions and industries at the international level.

Flicker-Free Spatial-PSK Modulation for Vehicular Image-Sensor Systems Based on Neural Networks (신경망 기반 차량 이미지센서 시스템을 위한 플리커 프리 공간-PSK 변조 기법)

  • Nguyen, Trang;Hong, Chang Hyun;Islam, Amirul;Le, Nam Tuan;Jang, Yeong Min
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.41 no.8
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    • pp.843-850
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    • 2016
  • This paper introduces a novel modulation scheme for vehicular communication in taking advantage of existing LED lights available on a car. Our proposed 2-Phase Shift Keying (2-PSK) is a spatial modulation approach in which a pair of LED light sources in a car (either rear LEDs or front LEDs) is used as a transmitter. A typical camera (i.e. low frame rate at no greater than 30fps) that either a global shutter camera or a rolling shutter camera can be used as a receiver. The modulation scheme is a part of our Image Sensor Communication proposal submitted to IEEE 802.15.7r1 (TG7r1) recently. Also, a neural network approach is applied to improve the performance of LEDs detection and decoding under the noisy situation. Later, some analysis and experiment results are presented to indicate the performance of our system

A Study on the Implovement of Voltage Regulator and Electronic Control Unit for Vehicle (차량용 전자제어장치와 전압조정기 개선에 관한 연구)

  • Kim, Sun-Ho;Kim, Hyo-Sang
    • Journal of Institute of Control, Robotics and Systems
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    • v.7 no.11
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    • pp.912-917
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    • 2001
  • In this study, we define the measuring method of crank angle precisely using an event and perform a study on the hardware structure and software algorithms which is applicable for the commercial engine. Also we developed a Computer-ECU(Personal computer based electronic control unit) using a computer and a microprocessor, for performing the ignition at a desire position(angle) and for controlling a duty ratio a pulse for ISC(Idle speed control). We applied these algorithms to the modeling which is induced a concept of event and got a better result than a conventional ECU in the state of transient as a result of performing air fuel ratio control in a commercial engine. This technique can be used for the back to improve ECU performance. It the present type of Hybrid I. C voltage regulator is altered to the new type of regulator, we will be surely able to reduce the production cost as well as simplify the design of alternator\`s rear bracket and rectifier part because of the removal of trio diode. Experiment is taken by MS-R004.

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THE INFLUENCE OF SOY ISOFLAVON TO THE SKIN AGING IN PRE- MENOPAUSAL WOMEN

  • Subchan, P.;Tranggono, R.I.S.;Djajadisastra, J.
    • Proceedings of the SCSK Conference
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    • 2003.09a
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    • pp.73-84
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    • 2003
  • Skin aging process on pre-menopausal women is a problem that needs to be prevented as early as possible. The decrease of oestrogen level which is one of the intrinsic factors of the skin aging process will affect the skin biological process, due to oestrogen receptors on the skin. A number of researches conducted on pre-menopausal women with the allocation of oestrogen hormone resulted in delaying the skin aging process. The administration of soy isoflavon, a phytoestrogen found in daily food, on pre-menopausal women is hoped to be able to prevent skin aging process, even clinically or molecular biologically. This research aims to explain the benefit of administering of soy isoflavon on skin aging process. The design of the research is randomised controlled trial (RCT). As many as 60 pre-menopausal women were collected with simple random sampling method. Soy isoflavon is an independent variable, while skin aging process is a dependent variable assessed from the hydration, sebum level, average roughness, depth of wrinkles, skin clarity, length of the telomere. Analysis was conducted using t and MANDVA tests and.the result showed a significance (F = 10,439; p = 0,001) over the allocation of soy isoflavon to the whole variable dependent, including the telomere length and the skin hydration, meant that allocation of soy isoflavon could delay skin aging process.

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