• Journal of Microbiology and Biotechnology
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• v.28 no.5
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• pp.831-838
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• 2018

Trophic interactions of introduced biocontrol fungi with soil animals can be a key determinant in the fungal proliferation and activity. This study investigated the trophic interaction of an introduced biocontrol fungus with soil nematodes. The biocontrol fungus Trichoderma harzianum ThzID1-M3 and the fungivorous nematode Aphelenchoides sp. (10 per gram of soil) were added to nonsterile soil, and microbial populations were monitored for 40 days. Similar results were obtained when the experiment was duplicated. ThzID1-M3 stimulated the population growth of indigenous nematodes (p < 0.05), regardless of whether Aphelenchoides sp. was added. Without ThzID1-M3, indigenous nematodes did not increase in number and the added Aphelenchoides sp. nematodes almost disappeared by day 10. With ThzID1-M3, population growth of nematodes was rapid between 5 and 10 days after treatment. ThzID1-M3 biomass peaked on day 5, dropped at day 10, and then almost disappeared at day 20, which was not influenced by the addition of nematodes. In contrast, a large quantity of ThzID1-M3 hyphae were present in a heat-treated soil in which nematodes were eliminated. Total fungal biomass in all treatments peaked on day 5 and subsequently decreased. Addition of nematodes increased the total fungal biomass (p < 0.05), but ThzID1-M3 addition did not affect the fungal biomass. Hyphae of total fungi when homogenously distributed did not support the nematode population growth; however, hyphae of the introduced fungus did when densely localized. The results suggest that soil fungivorous nematodes are an important constraint on the hyphal proliferation of fungal agents introduced into natural soils.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.13 no.1
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• pp.15-26
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• 2008

The NEMURO model is aimed to efficiently understand the interaction among factors of lower trophic level of a marine ecosystem, using data on solar radiation and sea water temperature. In this study, we analyzed the seasonal pattern of nutrients and planktons, and estimated productivity and biomass of planktons from 2002 to 2005. Nutrients($NO_3$, $NH_4$, and $Si(OH)_4$) which were used by phytoplankton showed a high concentration before the bloom of phytoplankton. Nutrients (DON, PON, and Opal) which were a byproduct of phytoplankton showed a high concentration in the same period as the bloom of phytoplankton. Both phytoplankton and zooplankton had two peaks in March and August. Estimated phytoplankton biomass from the NEMURO model showed a similar pattern with observed chlorophyll a concentrations. Biomasses of phytoplankton were bigger than those of zooplankton. Annual mean biomasses of small and large phytoplankton were estimated at 30.961 and $14.070\;{\mu}g\;l^{-1}$ respectively. Annual mean biomass of predatory zooplankton was greater than those of small and large zooplankton.

• Journal of Ecology and Environment
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• v.37 no.4
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• pp.185-194
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• 2014

Seasonal monitoring was implemented to understand the influence of macrophyte bed structure on the composition and trophic interaction of aquatic organisms (algae, zooplankton, macro-invertebrate, and fish) in a shallow wetland (Upo Wetland, South Korea). Distinct division of the plant assemblage (reed zone and mixed plant zone) was observed. The reed zone was composed solely of Phragmites communis, whereas the mixed plant zone comprised a diverse macrophyte assemblage (Salvinia natans, Spirodela polyrhiza, Trapa japonica, Ceratophyllum demersum, and Hydrilla verticillata). Most of the aquatic organisms were more abundant in the mixed plant zone than in the reed zone, and this was positively associated with the seasonal development of macrophyte cover. Stable isotope analysis showed seasonal interactions among aquatic organisms. The majority of aquatic animal (zooplankton, Odonata, and Ephemeroptera) were dependent on epiphytic particulate organic matter (EPOM), and the dependence on EPOM gradually increased toward autumn. Interestingly, Lepomis macrochirus consumed Ephemeroptera and zooplankton in both macrophyte zones, but Micropterus salmoides depended on different food items in the reed zone and the mixed plant zone. Although, M. salmoides in the reed zone showed food utilization similar to L. macrochirus, it consumed Odonata or small L. macrochirus in the mixed plant zone. Based on these results, it appears that differences in the structure of the two macrophyte zones support different assemblages of aquatic organisms, strongly influencing the trophic interactions between the aquatic organisms.

• Animal cells and systems
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• v.12 no.4
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• pp.211-217
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• 2008

Bax, a pro-apoptotic member of Bcl-2 family proteins, plays a central role in the mitochondria-dependent apoptosis. Apoptotic signals induce the translocation of Bax from cytosol into the mitochondria, which triggers the release of apoptogenic molecules such as cytochrome C and apoptosis-inducing factor, AIF. Bax-inhibiting peptide(BIP) is a cell permeable peptide comprised of five amino acids designed from the Bax-interaction domain of Ku70. Because BIP inhibits Bax translocation and Bax-mediated release of cytochrome C, BIP suppresses Bax-dependent apoptosis. In this study, we observed that BIP inhibited staurosporine-induced neuronal death in cultured cerebral cortex and cerebellar granule cells, but BIP failed to rescue granule cells from trophic signal deprivation-induced neuronal death, although both staurosporine-induced and trophic signal deprivation-induced neuronal death are dependent on Bax. These findings suggest that the mechanisms of the Bax activation may differ depending on the type of cell death induction, and thus BIP exhibits selective suppression of a subtype of Bax-dependent neuronal death.

• Korean Journal of Ecology and Environment
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• v.47 no.1
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• pp.24-31
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• 2014

This study was conducted to clarify the seasonal and elevational pattern of herbivore's feeding pattern in a temperate deciduous forest. We investigated the herbivore's feeding activity for three years (2011~2013) at three survey sites in Mt. Jirisan National Park (Piagol, Siamjae, Nogodan). We selected target tree species based on the dominance across the sites (Quercus, Acer, Rhododendron and Carpinus) and scored herbivore's feeding activity every one or two weeks from April to June using leaf damage index. We found that the herbivory started early at the low elevation site (Piagol, ${\approx}300m$), and the highest feeding activity occurred at the mid elevation site (Siamjae, ${\approx}900m$). At the highest elevation site (Nogodan, ${\approx}1300m$), the herbivory started late, but the total feeding activity accumulated quickly. Compared to the breeding time of Varied tit, an insectivore bird, it was overlapped with the feeding activity period of herbivores, suggesting close interaction among plants, insects and birds in this deciduous forest. We suggested a need of long-term monitoring of this tri-trophic interaction since duration of herbivore activity can be changed followed by climate change.

• ALGAE
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• v.28 no.4
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• pp.297-305
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• 2013

There is increasing interest in the relationships between marine bacteria and red tide organisms. Some bacteria are known to kill red tide organisms, and may be responsible for accelerating the termination of red tides. Thus, certain algicidal bacteria have been proposed for the control of red tides. Meanwhile, many red tide organisms are known to feed on marine bacteria. The roles of marine bacteria and red tide organisms are therefore reversible. In Korean waters, the killing of red tide organisms by algicidal bacteria, and also the feeding of red tide organisms on marine bacteria have been extensively investigated. The findings of such studies may influence the conventional view of red tide dynamics, and also planktonic food webs. Here, we review the species and concentrations of algicidal bacteria that kill red tide organisms in Korean waters, as well as the ingestion rate and grazing impact of red tide organisms on marine bacteria. Furthermore, we offer an insight into the ecological roles of these 2 components in marine planktonic food webs.

• Journal of Yeungnam Medical Science
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• v.38 no.1
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• pp.27-33
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• 2021

The gut is a complex organ that has played an important role in digestion, absorption, endocrine functions, and immunity. The gut mucosal barriers consist of the immunologic barrier and nonimmunologic barrier. During critical illnesses, the gut is susceptible to injury due to the induction of intestinal hyperpermeability. Gut hyperpermeability and barrier dysfunction may lead to systemic inflammatory response syndrome. Additionally, gut microbiota are altered during critical illnesses. The etiology of such microbiome alterations in critical illnesses is multifactorial. The interaction or systemic host defense modulation between distant organs and the gut microbiome is increasingly studied in disease research. No treatment modality exists to significantly enhance the gut epithelial integrity, permeability, or mucus layer in critically ill patients. However, multiple helpful approaches including clinical and preclinical strategies exist. Enteral nutrition is associated with an increased mucosal barrier in animal and human studies. The trophic effects of enteral nutrition might help to maintain the intestinal physiology, prevent atrophy of gut villi, reduce intestinal permeability, and protect against ischemia-reperfusion injury. The microbiome approach such as the use of probiotics, fecal microbial transplantation, and selective decontamination of the digestive tract has been suggested. However, its evidence does not have a high quality. To promote rapid hypertrophy of the small bowel, various factors have been reported, including the epidermal growth factor, membrane permeant inhibitor of myosin light chain kinase, mucus surrogate, pharmacologic vagus nerve agonist, immune-enhancing diet, and glucagon-like peptide-2 as preclinical strategies. However, the evidence remains unclear.

• Korean Journal of Ecology and Environment
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• v.57 no.1
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• pp.39-50
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• 2024

In ecosystems within limited resources, interspecific competition is inevitable, often leading to the competitive exclusion of inferior species. This study aims to provide foundational information for the conservation and restoration management of Microphysogobio rapidus by evaluating species' ecological response to biological factors within its habitat. To understand this relationship, we collected food web organisms from site where M. rapidus coexist with Microphysogobio yaluensis, a specie ecologically similar to M. rapidus, and evaluated the trophic levels (TL), isotopic niche space (INS), and the overlap of INS among fishes within the habitat using stable isotope analysis. Our analysis revealed that the M. rapidus exhibited a higher TL than M. yaluensis, with TL of 2.6 and 2.4, respectively. M. yaluensis exhibited a broad INS, significantly influencing the feeding characteristics of most fish. Conversely, M. rapidus showed a narrow INS and asymmetric feeding relationships with other species, in habitats with high competition levels. This feeding characteristics of M. rapidus indicate that the increase in competitors sharing the similar resources lead to a decrease in available resources and, consequently, is expected to result in a decrease in their density.

• BMB Reports
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• v.35 no.1
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• pp.116-126
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• 2002

Nitric oxide (NO), synthesized from L-arginine by NO synthases, is a small, lipophilic, diffusible, highly reactive molecule with dichotomous regulatory roles in many biological events under physiological and pathological conditions. NO can promote apoptosis (pro-apoptosis) in some cells, whereas it inhibits apoptosis (anti-apoptosis) in other cells. This complexity is a consequence of the rate of NO production and the interaction with biological molecules such as metal ion, thiol, protein tyrosine, and reactive oxygen species. Long-lasting overproduction of NO acts as a pro-apoptotic modulator, activating caspase family proteases through the release of mitochondrial cytochrome c into cytosol, up-regulation of the p53 expression, and alterations in the expression of apoptosis-associated proteins, including the Bcl-2 family. However, low or physiological concentrations of NO prevent cells from apoptosis that is induced by the trophic factor withdrawal, Fas, $TNF{\alpha}$/ActD, and LPS. The anti-apoptotic mechanism is understood on the basis of gene transcription of protective proteins. These include: heat shock protein, hemeoxygenase, or cyclooxygenase-2 and direct inhibition of the apoptotic executive effectors caspase family protease by S-nitrosylation of the cysteine thiol group in their catalytic site in a cell specific way. Our current understanding of the mechanisms by which NO exerts both pro- and anti-apototic action is discussed in this review article.

• The Korean Journal of Pain
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• v.19 no.2
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• pp.228-232
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• 2006

Complex regional pain syndrome (CRPS) type 1 is characterized by the presence of pain, which is severe, diffuse and associated with allodynia, and is also associated with autonomic and trophic changes. The sensitization phenomena of CRPS also cause allodynia and itching, as well as pain. These symptoms are the issues associated with the treatment of CRPS. Under normal conditions, an antagonistic interaction exists between the pain and itching, but the patterns of peripheral and central sensitization phenomena for the pain and itching are very similar. The chronic pain and chronic itch have similar characteristics in their developmental and therapeutical principles. Herein, our experience of 2 cases of CRPS, which showed improvement of these facial symptoms after sphenopalatine ganglion radiofrequency thermocoagulation, but were not controlled by spinal cord stimulation or other conservative treatments, is reported.