DOI QR코드

DOI QR Code

Rhodobacter sphaeroides에서의 광합성유전자(puf, puc, puhA, bchC, bchE, bchF와 bchI)의 발현조절

Regulation of Photosynthesis Genes (puf, puc, puhA, bchC, bchE, bchF, and bchI) in Rhodobacter sphaeroides

  • Ko, In-Jeong (Korea Science Academy) ;
  • Kim, Yong-Jin (Department of Microbiology, Pusan National University) ;
  • Lee, Jin-Mok (Department of Microbiology, Pusan National University) ;
  • Shin, Sun-Joo (Department of Microbiology, Pusan National University) ;
  • Oh, Jeong-Il (Department of Microbiology, Pusan National University)
  • 발행 : 2006.07.31

초록

본 연구에서는 lacZ transcriptional fusion plasmid를 이용하여 광합성 세균인 Rhodobacter sphaeroides에서의 7가지 광합성유전자 (puf, puc, puhA, bchC, bchE, bchF, bchI) 발현의 경향과 조절을 조사하였다. R. sphaeroides에서 puhA와 bchI를 제외한 모든 광합성유전자들이 호기적 조건과 비교했을 때 혐기적 조건에서 더욱 강하게 발현되었다. puhA 유전자는 bchFNBHLM-RSP0290과 operon을 형성하며, bchI 유전자는 crtA와 operon을 이루는 것으로 나타났다. 광합성 조건에서 자란 R. sphaeroides의 puf, puc, bchCXYZ operon의 발현은 빛의 세기에 비례하는 반면, bchFNBHLM(RSP0290 puhA) operon의 발현은 빛의 세기에 반비례 하였다. bchEJG의 발현은 $10\;W/m^2$의 빛이 조사된 광합성 조건에서 제일 낮았으며, $100\;W/m^2$의 빛의 광합성 조건에서 가장 높았다. R. sphaeroides의 산소인지와 빛 인지에 관련된 세 가지 주요 조절기작에 의한 광합성유전자 조절은 다음과 같다. puf와 bchC는 PpsR repressor와 PrrBA two-component system에 의해 조절된다. 그리고 puc operon은 PpsR, FnrL, PrrBA system에 의해 조절된다. bchE의 발현은 FnrL과 PrrBA system에 의해 조절되는 반면, bchF는 오로지 PpsR에 의해서만 조절된다. PpsR repressor는 강한 세기의 빛 조건에서 bchf 발현억제의 원인이 되며, FnrL은 그 자체가 산소를 인지하는 기능 이외에도 세포질의 산화/환원 상태의 인지에 관련될 것으로 보인다.

Here we examined the expression patterns and regulation of seven photosynthesis (PS) genes (puf, puc, puhA, bchC, bchE, bchF, and bchI) in the anoxygenic photosynthetic bacterium, Rhodobacter sphaeroides, based on lacZ reporter gene assay. Expression of the tested PS genes, except puhA and bchI, were strongly induced in R. sphaeroides grown under anaerobic conditions relative to that under aerobic conditions. The puhA and bchI genes appear to form the operons together with bchFNBHLM-RSP0290 and crtA, respectively. Expression of the puf, puc, and bchCXYZ operons in R. sphaeroides grown photosynthetically was proportional to the incident light intensity, whereas that of bchFNBHLM(RSP0290-puhA) was inversely related to light intensity. Expression of bchEJG was lowest under medium-light photosynthetic conditions $(10\;W/m^2)$ and highest under high light conditions $(100\;W/m^2)$. The regulation of PS genes by the three major regulatory systems involved in oxygen- and light-sensing in R. sphaeroides is as following: puf and bchC are regulated by both the PpsR repressor and the PrrBA two-component system. The puc operon is under control of PpsR, FnrL, and PrrBA system. Expression of bchE is controlled by FnrL and PrrBA two-component system, whereas bchF is regulated exclusively by PpsR. It was demonstrated that the PpsR repressor is responsible for high-light repression of bchF and that FnrL might be involved in perceiving the cellular redox state in addition to sensing $O_2$ itself.

키워드

참고문헌

  1. Choudhary, M., and S. Kaplan. 2000. DNA sequence analysis of the photosynthesis region of Rhodobacter sphaeroides 2.4.1. Nucleic Acids Res. 28, 862-867 https://doi.org/10.1093/nar/28.4.862
  2. Davis, J., T. J. Donohue, and S. Kaplan. 1988. Construction, characterization, and complementation of a Puf- mutant of Rhodobacter sphaeroides. J. Bacteriol. 170, 320-329 https://doi.org/10.1128/jb.170.1.320-329.1988
  3. Dryden, S. C., and S. Kaplan. 1990. Localization and structural analysis of the ribosomal RNA operons of Rhodobacter sphaeroides. Nucleic Acids Res. 18, 7267-7277 https://doi.org/10.1093/nar/18.24.7267
  4. Elsen, S., W. Dischert, A. Colbeau, and C. E. Bauer. 2000. Expression of uptake hydrogenase and molybdenum nitrogenase in Rhodobacter capsulatus is coregulated by the RegB-RegA two-component regulatory system. J. Bacteriol. 182, 2831-2837 https://doi.org/10.1128/JB.182.10.2831-2837.2000
  5. Eraso, J. M., and S. Kaplan. 1994. prrA, a putative response regulator involved in oxygen regulation of photosynthesis gene expression in Rhodobacter sphaeroides. J. Bacteriol. 176, 32-43 https://doi.org/10.1128/jb.176.1.32-43.1994
  6. Eraso, J. M., and S. Kaplan. 1995. Oxygen-insensitive synthesis of the photosynthetic membranes of Rhodobacter sphaeroides: a mutant histidine kinase. J. Bacteriol. 177, 2695-2706 https://doi.org/10.1128/jb.177.10.2695-2706.1995
  7. Eraso, J. M., and S. Kaplan. 1996. Complex regulatory activities associated with the histidine kinase PrrB in expression of photosynthesis genes in Rhodobacter sphaeroides 2.4.1. J. Bacteriol. 178, 7037-7046 https://doi.org/10.1128/jb.178.24.7037-7046.1996
  8. Gomelsky, M., I. M. Horne, H. J. Lee, J. M. Pemberton, A.G. McEwan, and S. Kaplan. 2000. Domain structure, oligomeric state, and mutational analysis of PpsR, the Rhodobacter sphaeroides repressor of photosystem gene expression. J. Bacteriol. 182, 2253-2261 https://doi.org/10.1128/JB.182.8.2253-2261.2000
  9. Gomelsky, M., and S. Kaplan. 1995. appA, a novel gene encoding a trans-acting factor involved in the regulation of photosynthesis gene expression in Rhodobacter sphaeroides 2.4.1. J. Bacteriol. 177, 4609-4618 https://doi.org/10.1128/jb.177.16.4609-4618.1995
  10. Gomelsky, M., and S. Kaplan. 1995. Genetic evidence that PpsR from Rhodobacter sphaeroides 2.4.1 functions as a repressor of puc and bchF expression. J. Bacteriol. 177, 1634-1637 https://doi.org/10.1128/jb.177.6.1634-1637.1995
  11. Gomelsky, M., and S. Kaplan. 1997. Molecular genetic analysis suggesting interactions between AppA and PpsR in regulation of photosynthesis gene expression in Rhodobacter sphaeroides 2.4.1. J. Bacteriol. 179, 128-134 https://doi.org/10.1128/jb.179.1.128-134.1997
  12. Gomelsky, M., and S. Kaplan. 1998. AppA, a redox regulator of photosystem formation in Rhodobacter sphaeroides 2.4.1, is a flavoprotein. Identification of a novel FAD binding domain. J. Biol. Chem. 273, 35319-35325 https://doi.org/10.1074/jbc.273.52.35319
  13. Happ, H. N., S. Braatsch, V. Broschek, L. Osterloh, and G. Klug. 2005. Light-dependent regulation of photosynthesis genes in Rhodobacter sphaeroides 2.4.1 is coordinately controlled by photosynthetic electron transport via the PrrBA two-component system and the photoreceptor AppA. Mol. Microbiol. 58, 903-914 https://doi.org/10.1111/j.1365-2958.2005.04882.x
  14. Horne, I. M., J. M. Pemberton, and A. McEwan. 1996. Photosynthesis gene expression in Rhodobacter sphaeroides is regulated by redox changes which are linked to electron transport. Microbiology 142, 2831-2838 https://doi.org/10.1099/13500872-142-10-2831
  15. Jessee, J. 1986. New subcloning efficiency competent cells: $>1\;{\times}\;10^6$ transformants/ug. Focus 8, 9
  16. Kiley, P. J., and H. Beinert. 1998. Oxygen sensing by the global regulator, FNR: the role of the iron-sulfur cluster. FEMS Microbiol. Rev. 22, 341-352 https://doi.org/10.1111/j.1574-6976.1998.tb00375.x
  17. Kiley, P. J., and S. Kaplan. 1988. Molecular genetics of photosynthetic membrane biosynthesis in Rhodobacter sphaeroides. Microbiol. Rev. 52, 50-69
  18. Lee, J. K., and S. Kaplan. 1992. cis-acting regulatory elements involved in oxygen and light control of puc operon transcription in Rhodobacter sphaeroides. J. Bacteriol. 174, 1146-1157 https://doi.org/10.1128/jb.174.4.1146-1157.1992
  19. Lee, J. K., and S. Kaplan. 1995. Transcriptional regulation of puc operon expression in Rhodobacter sphaeroides. Analysis of the cis-acting downstream regulatory sequence. J. Biol. Chem. 270, 20453-20458 https://doi.org/10.1074/jbc.270.35.20453
  20. Mao, L., C. Mackenzie, J. H. Roh, J. M. Eraso, S. Kaplan, and H. Resat. 2005. Combining microarray and genomic data to predict DNA binding motifs. Microbiology 151, 3197-3213 https://doi.org/10.1099/mic.0.28167-0
  21. Masuda, S., and C. E. Bauer. 2002. AppA is a blue light photoreceptor that antirepresses photosynthesis gene expression in Rhodobacter sphaeroides. Cell 110, 613-623 https://doi.org/10.1016/S0092-8674(02)00876-0
  22. Oh, J. I., J. M. Eraso, and S. Kaplan. 2000. Interacting regulatory circuits involved in orderly control of photosynthesis gene expression in Rhodobacter sphaeroides 2.4.1. J. Bacteriol. 182, 3081-3087 https://doi.org/10.1128/JB.182.11.3081-3087.2000
  23. Oh, J. I., and S. Kaplan. 1999. The cbb3 terminal oxidase of Rhodobacter sphaeroides 2.4.1: structural and functional implications for the regulation of spectral complex formation. Biochemistry 38, 2688-2696 https://doi.org/10.1021/bi9825100
  24. Oh, J. I., and S. Kaplan. 2000. Redox signaling: globalization of gene expression. EMBO J. 19, 4237-4247 https://doi.org/10.1093/emboj/19.16.4237
  25. Oh, J. I., and S. Kaplan. 2001. Generalized approach to the regulation and integration of gene expression. Mol. Microbiol. 39, 1116 - 1123 https://doi.org/10.1111/j.1365-2958.2001.02299.x
  26. Roh, J. H., W. E. Smith, and S. Kaplan. 2004. Effects of oxygen and light intensity on transcriptome expression in Rhodobacter sphaeroides 2.4.1. Redox active gene expression profile. J. Biol. Chem. 279, 9146-9155 https://doi.org/10.1074/jbc.M311608200
  27. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular Cloning: a Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
  28. Simon, R., U. Priefer, and A. Puhler. 1983. A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram-negative bacteria. Bio/Technol. 1, 784-791 https://doi.org/10.1038/nbt1183-784
  29. Suzuki, J. Y., D. W. Bollivar, and C. E. Bauer. 1997. Genetic analysis of chlorophyll biosynthesis. Annu. Rev. Genet. 31, 61-89 https://doi.org/10.1146/annurev.genet.31.1.61
  30. van Neil, C. B. 1944. The culture, general physiology, morphology, and classification of the non-sulfur purple and brown bacteria. Bacterial Rev. 8, 1-118
  31. Yeliseev, A. A., J. M. Eraso, and S. Kaplan. 1996. Differential carotenoid composition of the B875 and B800-850 photosynthetic antenna complexes in Rhodobacter sphaeroides 2.4.1: involvement of spheroidene and spheroidenone in adaptation to changes in light intensity and oxygen availability. J. Bacteriol. 178, 5877-5883
  32. Zeilstra-Ryalls, J., M. Gomelsky, J. M. Eraso, A. Yeliseev, J. O'Gara, and S. Kaplan. 1998. Control of photosystem formation in Rhodobacter sphaeroides. J. Bacteriol. 180, 2801-2809
  33. Zeilstra-Ryalls, J. H., K. Gabbert, N. J. Mouncey, S. Kaplan, and R. G. Kranz. 1997. Analysis of the fnrL gene and its function in Rhodobacter capsulatus. J. Bacteriol. 179, 7264-7273 https://doi.org/10.1128/jb.179.23.7264-7273.1997
  34. Zeilstra-Ryalls, J. H., and S. Kaplan. 1998. Role of the fnrL gene in photosystem gene expression and photosynthetic growth of Rhodobacter sphaeroides 2.4.1. J. Bacteriol. 180, 1496-1503